RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GAR1Q9NY12 217 aaKnown RBP11.85□□□□□ -0.51
VRK3-221ENST00000600284 OR2T8A6NH00 312 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 NDUFA4O00483 81 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 TBPP20226 339 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 RND3P61587 244 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 CTF1Q16619 201 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 H2BFWTQ7Z2G1 175 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 WFDC10AQ9H1F0 79 aa11.84□□□□□ -0.51
VRK3-221ENST00000600284 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
VRK3-221ENST00000600284 RYR2Q92736 4967 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 DBX1A6NMT0 343 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 K7EIM0 57 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 K7EMT4 169 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 SCAF4O95104 1147 aaKnown RBP11.83□□□□□ -0.52
VRK3-221ENST00000600284 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 ZFAND6Q6FIF0 208 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 OR2C3Q8N628 320 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 SPAG8Q99932 426 aaPredicted RBP11.83□□□□□ -0.52
VRK3-221ENST00000600284 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
VRK3-221ENST00000600284 CSMD3Q7Z407 3707 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
VRK3-221ENST00000600284 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
VRK3-221ENST00000600284 M0QYG6 137 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 TSPAN4O14817 238 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
VRK3-221ENST00000600284 HSPE1P61604 102 aaKnown RBP11.82□□□□□ -0.52
VRK3-221ENST00000600284 PRCDQ00LT1 54 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 RNASE10Q5GAN6 216 aaKnown RBP11.82□□□□□ -0.52
VRK3-221ENST00000600284 LAMTOR1Q6IAA8 161 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 LHFPL1Q86WI0 220 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 ZNF114Q8NC26 417 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 TXN2Q99757 166 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 CHRDL1Q9BU40 450 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 NAA50Q9GZZ1 169 aaKnown RBP11.82□□□□□ -0.52
VRK3-221ENST00000600284 MTFP1Q9UDX5 166 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
VRK3-221ENST00000600284 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 C15orf62A8K5M9 175 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 ATG12O94817 140 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 CD3DP04234 171 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 CTSGP08311 255 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 SMIM18P0DKX4 95 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 ADMP35318 185 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
VRK3-221ENST00000600284 Q56UQ5 140 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 GPR107Q5VW38 600 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 OR52I2Q8NH67 350 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 MRGPRFQ96AM1 343 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 GGTLC1Q9BX51 225 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 RETNQ9HD89 108 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 EXTL2Q9UBQ6 330 aa11.81□□□□□ -0.52
VRK3-221ENST00000600284 LYSTQ99698 3801 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
VRK3-221ENST00000600284 LCE6AA0A183 80 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 I3L2K1 104 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 PGAM2P15259 253 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 MFAP4P55083 255 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 ERHP84090 104 aaKnown RBP11.8□□□□□ -0.52
VRK3-221ENST00000600284 UBAC2Q8NBM4 344 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 TERB2Q8NHR7 220 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 ABHD1Q96SE0 405 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 FAM110AQ9BQ89 295 aa11.8□□□□□ -0.52
VRK3-221ENST00000600284 INS-IGF2F8WCM5 200 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 NUPL2O15504 423 aaKnown RBP11.79□□□□□ -0.52
VRK3-221ENST00000600284 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 CD74P04233 296 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 PIGPP57054 158 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 TAS2R19P59542 299 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 MRPS10P82664 201 aaKnown RBP11.79□□□□□ -0.52
VRK3-221ENST00000600284 SSBP1Q04837 148 aaKnown RBP11.79□□□□□ -0.52
VRK3-221ENST00000600284 TMEM229BQ8NBD8 167 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 C20orf24Q9BUV8 137 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
VRK3-221ENST00000600284 TENM2Q9NT68 2774 aa11.79□□□□□ -0.52
VRK3-221ENST00000600284 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
VRK3-221ENST00000600284 RNASE12Q5GAN4 147 aaKnown RBP11.78□□□□□ -0.52
VRK3-221ENST00000600284 CCDC71LQ8N9Z2 235 aa11.78□□□□□ -0.52
VRK3-221ENST00000600284 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
VRK3-221ENST00000600284 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
VRK3-221ENST00000600284 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
VRK3-221ENST00000600284 SMPXQ9UHP9 88 aa11.78□□□□□ -0.52
VRK3-221ENST00000600284 OR4C46A6NHA9 309 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 GABARAPH6UMI1 98 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 MT-CO2P00403 227 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 P0C879 139 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 PI3P19957 117 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 ALDH3B2P48448 385 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 GPR141Q7Z602 305 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 TP53RKQ96S44 253 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.53
VRK3-221ENST00000600284 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.53
VRK3-221ENST00000600284 A0A0B4J293 547 aa11.76□□□□□ -0.53
VRK3-221ENST00000600284 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms