RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 LHFPL4Q7Z7J7 247 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR1P1Q8NH06 330 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 DCHS2Q6V1P9 2916 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 SRRM4A7MD48 611 aaKnown RBP9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 VSTM5A8MXK1 200 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 IGFBP2P18065 325 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 TOMM20LQ6UXN7 152 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 ZNF788Q6ZQV5 615 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 C1orf174Q8IYL3 243 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 KDF1Q8NAX2 398 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM68Q96MH6 324 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 RAXQ9Y2V3 346 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 F2RL2O00254 374 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 AMBPP02760 352 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 GNB1P62873 340 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 SLC35B1P78383 322 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 ZCCHC14Q8WYQ9 949 aaKnown RBP9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 TANC2Q9HCD6 1990 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 HRASP01112 189 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 ZNF664Q8N3J9 261 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR4P4Q8NGL7 312 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR2T10Q8NGZ9 312 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 MGST2Q99735 147 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 COMMD5Q9GZQ3 224 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 TRAPPC1Q9Y5R8 145 aa9.45□□□□□ -0.9
ARHGEF1-220ENST00000600274 A0A1B0GW64 132 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR10J4P0C629 311 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 HSPE1P61604 102 aaKnown RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 IGF2-ASQ6U949 168 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 FAM169BQ8N8A8 192 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 SDF2L1Q9HCN8 221 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 PPP1R14DQ9NXH3 145 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 TET2Q6N021 2002 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR7C2O60412 319 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 APOA2P02652 100 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 SAA1P0DJI8 122 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 CT45A6P0DMU7 189 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 CT45A5P0DMU8 189 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 CT45A7P0DMV0 189 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 NBL1P41271 181 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 RBPJQ06330 500 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 LRRC10Q5BKY1 277 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 BAGE3Q86Y29 109 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 MS4A10Q96PG2 267 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 C15orf61A6NNL5 157 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 FOXH1O75593 365 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 PAX5Q02548 391 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 TCTEX1D1Q8N7M0 179 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 NEIL1Q96FI4 390 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 RAB9BQ9NP90 201 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 WDR83OSQ9Y284 106 aa9.44□□□□□ -0.9
ARHGEF1-220ENST00000600274 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 NPSP0C0P6 89 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 ARSJQ5FYB0 599 aaPredicted RBP9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 STPG3Q8N7X2 389 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 ST6GALNAC3Q8NDV1 305 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM170AQ8WVE7 144 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 IMMP2LQ96T52 175 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 GAL3ST2Q9H3Q3 398 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 SERTAD4Q9NUC0 356 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 E7EQL1 145 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 CFHR2P36980 270 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 TDGF1P3P51864 188 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 C1QL4Q86Z23 238 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 GGTLC1Q9BX51 225 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 HIVEP3Q5T1R4 2406 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 CCL21O00585 134 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 TGOLN2O43493 480 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 SLC25A17O43808 307 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 IL6RP08887 468 aaPredicted RBP9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 GNB2P62879 340 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 PNRC1Q12796 327 aaPredicted RBP9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 RAB31Q13636 194 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 HCP5Q6MZN7 132 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 KCNIP4Q6PIL6 250 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 TEPPQ6URK8 271 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 RNASE6Q93091 150 aaKnown RBP9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 NPVFQ9HCQ7 196 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 FKBP11Q9NYL4 201 aa9.43□□□□□ -0.9
ARHGEF1-220ENST00000600274 WNT2P09544 360 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 GZMBP10144 247 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 VDAC2P45880 294 aaPredicted RBP9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 TBX15Q96SF7 602 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 NGBQ9NPG2 151 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 332.7 ms