RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 IGHV3-48P01763 117 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 REG1AP05451 166 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 IL3RAP26951 378 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 MC5RP33032 325 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 PSMB3P49720 205 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 PRRX1P54821 245 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.55
VRK3-217ENST00000599538 TNFRSF14Q92956 283 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 TUBA4BQ9H853 241 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 MLXQ9UH92 298 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 LIPFP07098 398 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 LINC00869P0C866 280 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 UBE2G2P60604 165 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 KLRD1Q13241 179 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 ZNF343Q6P1L6 599 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 C19orf35Q6ZS72 473 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 OR4F5Q8NH21 305 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 VSTM2AQ8TAG5 236 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 TIMD4Q96H15 378 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 UBTD1Q9HAC8 227 aa11.64□□□□□ -0.55
VRK3-217ENST00000599538 ABCA1O95477 2261 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 OR2C1O95371 312 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 APELAP0DMC3 54 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 NPPCP23582 126 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 PRR20EP86478 221 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 PRR20CP86479 221 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 PRR20DP86480 221 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 PRR20BP86481 221 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 PRR20AP86496 221 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 KIAA0141Q14154 515 aaPredicted RBP11.63□□□□□ -0.55
VRK3-217ENST00000599538 ZNF674Q2M3X9 581 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 BEND2Q8NDZ0 799 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 OR2T6Q8NHC8 308 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 C2CD4CQ8TF44 421 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 RPUSD4Q96CM3 377 aaKnown RBP11.63□□□□□ -0.55
VRK3-217ENST00000599538 FNDC4Q9H6D8 234 aaPredicted RBP11.63□□□□□ -0.55
VRK3-217ENST00000599538 CHODLQ9H9P2 273 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 LY6LH3BQJ8 138 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 SOX15O60248 233 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 RPL29P47914 159 aaKnown RBP11.63□□□□□ -0.55
VRK3-217ENST00000599538 ATP5G3P48201 142 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 SSBP2P81877 361 aaPredicted RBP11.63□□□□□ -0.55
VRK3-217ENST00000599538 CD69Q07108 199 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 VMA21Q3ZAQ7 101 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 SDF2L1Q9HCN8 221 aa11.63□□□□□ -0.55
VRK3-217ENST00000599538 FOXH1O75593 365 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 RBP4P02753 201 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 ERHP84090 104 aaKnown RBP11.62□□□□□ -0.55
VRK3-217ENST00000599538 RUSC1-AS1Q66K80 236 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 SPNS3Q6ZMD2 512 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 OR51G1Q8NGK1 321 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 SSBP3Q9BWW4 388 aaPredicted RBP11.62□□□□□ -0.55
VRK3-217ENST00000599538 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 SLC45A2Q9UMX9 530 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 URGCP-MRPS24S4R325 110 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 FLNCQ14315 2725 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PRD5 423 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PRF3 423 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PRM7 423 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 ACTL6BO94805 426 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 MT-ND4LP03901 98 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 CRYGBP07316 175 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 OR10J1P30954 320 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 LGALS7P47929 136 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 LGALS4P56470 323 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 RPEQ96AT9 228 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 PARLQ9H300 379 aa11.62□□□□□ -0.55
VRK3-217ENST00000599538 MRPL36Q9P0J6 103 aaKnown RBP11.62□□□□□ -0.55
VRK3-217ENST00000599538 CACNA1BQ00975 2339 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 C11orf94C9JXX5 98 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 FNDC10F2Z333 226 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 ZFP36P26651 326 aaKnown RBP11.61□□□□□ -0.55
VRK3-217ENST00000599538 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
VRK3-217ENST00000599538 HABP2Q14520 560 aaPredicted RBP11.61□□□□□ -0.55
VRK3-217ENST00000599538 PSG5Q15238 335 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 FBLN7Q53RD9 439 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 HCP5Q6MZN7 132 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 LHFPL4Q7Z7J7 247 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 SSX3Q99909 188 aa11.61□□□□□ -0.55
VRK3-217ENST00000599538 A0A087WWC5 75 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PN81 502 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 IGLC7A0M8Q6 106 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 AREGP15514 252 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 RAB5AP20339 215 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 CHRNA7P36544 502 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 TNXAQ16473 311 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 PRSS8Q16651 343 aa11.6□□□□□ -0.55
VRK3-217ENST00000599538 SLC16A13Q7RTY0 426 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms