RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 ST8SIA2Q92186 375 aa15.81■□□□□ 0.12
IRF3-221ENST00000598808 CITED2Q99967 270 aaPredicted RBP15.81■□□□□ 0.12
IRF3-221ENST00000598808 CACFD1Q9UGQ2 172 aa15.81■□□□□ 0.12
IRF3-221ENST00000598808 FBXO7Q9Y3I1 522 aa15.81■□□□□ 0.12
IRF3-221ENST00000598808 KBTBD11O94819 623 aa15.8■□□□□ 0.12
IRF3-221ENST00000598808 TPT1P13693 172 aaKnown RBP15.8■□□□□ 0.12
IRF3-221ENST00000598808 AKR1C2P52895 323 aa15.8■□□□□ 0.12
IRF3-221ENST00000598808 OR4A47Q6IF82 309 aa15.8■□□□□ 0.12
IRF3-221ENST00000598808 UNQ5815/PRO19632Q6UWF5 114 aa15.8■□□□□ 0.12
IRF3-221ENST00000598808 MMD2Q8IY49 270 aa15.8■□□□□ 0.12
IRF3-221ENST00000598808 ZNF471Q9BX82 626 aaPredicted RBP15.8■□□□□ 0.12
IRF3-221ENST00000598808 ZNF430Q9H8G1 570 aaPredicted RBP15.8■□□□□ 0.12
IRF3-221ENST00000598808 TET2Q6N021 2002 aaPredicted RBP15.8■□□□□ 0.12
IRF3-221ENST00000598808 CFDP00746 253 aaPredicted RBP15.79■□□□□ 0.12
IRF3-221ENST00000598808 KRASP01116 189 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 IGF1P05019 195 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 APELAP0DMC3 54 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 S100A1P23297 94 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 G6PCP35575 357 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 TMEM267Q0VDI3 215 aaPredicted RBP15.79■□□□□ 0.12
IRF3-221ENST00000598808 GPR146Q96CH1 333 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 ZC4H2Q9NQZ6 224 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 TMEM140Q9NV12 185 aa15.79■□□□□ 0.12
IRF3-221ENST00000598808 A0A1W2PN81 502 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 MARCH11A6NNE9 402 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 M0QZ24 198 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 WRBO00258 174 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 IGKV1-39P01597 117 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 IGKV1D-39P04432 117 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 CHRNA7P36544 502 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 TEX38Q6PEX7 206 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 LFNGQ8NES3 379 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 RAB40CQ96S21 281 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 SLC25A31Q9H0C2 315 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 PLXNB1O43157 2135 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 LINC00862A6NCI5 91 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 OPN1MWP04001 364 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 OPN1MW2P0DN77 364 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 OPN1MW3P0DN78 364 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 VAMP2P63027 116 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 CXorf66Q5JRM2 361 aaPredicted RBP15.78■□□□□ 0.12
IRF3-221ENST00000598808 C10orf55Q5SWW7 151 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 EIF5AL1Q6IS14 154 aaKnown RBP15.78■□□□□ 0.12
IRF3-221ENST00000598808 LCNL1Q6ZST4 164 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 PUSL1Q8N0Z8 303 aaKnown RBP15.78■□□□□ 0.12
IRF3-221ENST00000598808 SGMS2Q8NHU3 365 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 TMEM167AQ8TBQ9 72 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 LRRC20Q8TCA0 184 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 WIPF2Q8TF74 440 aaPredicted RBP15.78■□□□□ 0.12
IRF3-221ENST00000598808 SLC25A32Q9H2D1 315 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 C11orf1Q9H5F2 150 aa15.78■□□□□ 0.12
IRF3-221ENST00000598808 RCL1Q9Y2P8 373 aaKnown RBP15.78■□□□□ 0.12
IRF3-221ENST00000598808 MSGN1A6NI15 193 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 JTBO76095 146 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 LY86O95711 162 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 IGKV1-5P01602 117 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 PF4V1P10720 104 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 RPL8P62917 257 aaKnown RBP15.77■□□□□ 0.11
IRF3-221ENST00000598808 BAP18Q8IXM2 172 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 COMMD1Q8N668 190 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 SRSF12Q8WXF0 261 aaKnown RBP15.77■□□□□ 0.11
IRF3-221ENST00000598808 ZNF355PQ9NSJ1 428 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 BET1LQ9NYM9 111 aa15.77■□□□□ 0.11
IRF3-221ENST00000598808 FOXA2Q9Y261 457 aaPredicted RBP15.77■□□□□ 0.11
IRF3-221ENST00000598808 NUDT19A8MXV4 375 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 P0C879 139 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 TAS2R30P59541 319 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 BAXQ07812 192 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 TCTEX1D4Q5JR98 221 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 OR2C3Q8N628 320 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 OR4A5Q8NH83 315 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 LYRM2Q9NU23 88 aaPredicted RBP15.76■□□□□ 0.11
IRF3-221ENST00000598808 CACNG5Q9UF02 275 aa15.76■□□□□ 0.11
IRF3-221ENST00000598808 TSSC4Q9Y5U2 329 aaPredicted RBP15.76■□□□□ 0.11
IRF3-221ENST00000598808 RPS10-NUDT3A0A1W2PQS6 291 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 MED6O75586 246 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 EGR2P11161 476 aaPredicted RBP15.75■□□□□ 0.11
IRF3-221ENST00000598808 RPL27AP46776 148 aaKnown RBP15.75■□□□□ 0.11
IRF3-221ENST00000598808 SSBP2P81877 361 aaPredicted RBP15.75■□□□□ 0.11
IRF3-221ENST00000598808 MRGPRG-AS1Q2M3A8 158 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 NDUFA11Q86Y39 141 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 OR5T1Q8NG75 326 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 CYTL1Q9NRR1 136 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 MED9Q9NWA0 146 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 ZNF580Q9UK33 172 aa15.75■□□□□ 0.11
IRF3-221ENST00000598808 TRAV3A0A0B4J244 114 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 RBMXL2O75526 392 aaKnown RBP15.74■□□□□ 0.11
IRF3-221ENST00000598808 RPLP1P05386 114 aaKnown RBP15.74■□□□□ 0.11
IRF3-221ENST00000598808 MYOD1P15172 320 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 OR2B8PP59922 312 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 POLR2GP62487 172 aaKnown RBP eCLIP15.74■□□□□ 0.11
IRF3-221ENST00000598808 RPL23AP62750 156 aaKnown RBP15.74■□□□□ 0.11
IRF3-221ENST00000598808 CFHR3Q02985 330 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 FOXE3Q13461 319 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 H2BFWTQ7Z2G1 175 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 SLC7A5P1Q8MH63 180 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 COMMD5Q9GZQ3 224 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.74■□□□□ 0.11
IRF3-221ENST00000598808 TRRAPQ9Y4A5 3859 aa15.74■□□□□ 0.11
IRF3-221ENST00000598808 BORCS7-ASMTA0A0B4J1R7 106 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms