RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SLC25A24Q6NUK1 477 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 FAAP20Q6NZ36 180 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 PLET1Q6UQ28 207 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 UXS1Q8NBZ7 420 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 SCARB1Q8WTV0 552 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 TSC22D3Q99576 134 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 CHRDL1Q9BU40 450 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 SLC2A8Q9NY64 477 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 CEPT1Q9Y6K0 416 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 STARD9Q9P2P6 4700 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
LIG1-212ENST00000596549 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
LIG1-212ENST00000596549 CTDSP2O14595 271 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 TPPPO94811 219 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 SCAF4O95104 1147 aaKnown RBP9.78□□□□□ -0.84
LIG1-212ENST00000596549 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
LIG1-212ENST00000596549 S100GP29377 79 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 PIGPP57054 158 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 PRCDQ00LT1 54 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 H2BFWTQ7Z2G1 175 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 BSCL2Q96G97 398 aaPredicted RBP9.78□□□□□ -0.84
LIG1-212ENST00000596549 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
LIG1-212ENST00000596549 TMEM56Q96MV1 263 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 FAM110AQ9BQ89 295 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 HIPK2Q9H2X6 1198 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 TUBA4BQ9H853 241 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
LIG1-212ENST00000596549 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 CYB5BO43169 146 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 IFNA6P05013 189 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 PGAM2P15259 253 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 TBPP20226 339 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 ELLP55199 621 aaPredicted RBP9.77□□□□□ -0.85
LIG1-212ENST00000596549 SPINK9Q5DT21 86 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 CLVS1Q8IUQ0 354 aaPredicted RBP9.77□□□□□ -0.85
LIG1-212ENST00000596549 OR2C3Q8N628 320 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 TMEM229BQ8NBD8 167 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 UBAC2Q8NBM4 344 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 OR13C8Q8NGS7 320 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 OR1P1Q8NH06 330 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 DYNC2LI1Q8TCX1 351 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 MARC2Q969Z3 335 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 FKBP11Q9NYL4 201 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 UFC1Q9Y3C8 167 aa9.77□□□□□ -0.85
LIG1-212ENST00000596549 IGHV3OR16-8A0A075B7F1 116 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 GABARAPH6UMI1 98 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 I3L2K1 104 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 RGS5O15539 181 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 RAB3DO95716 219 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 TAS2R19P59542 299 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 SMIM4Q8WVI0 70 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 ISOC1Q96CN7 298 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 ATP6V0BQ99437 205 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 PALMDQ9NP74 551 aa9.76□□□□□ -0.85
LIG1-212ENST00000596549 CCDC59Q9P031 241 aaKnown RBP9.76□□□□□ -0.85
LIG1-212ENST00000596549 MRPL27Q9P0M9 148 aaKnown RBP9.76□□□□□ -0.85
LIG1-212ENST00000596549 DYNC2H1Q8NCM8 4307 aaKnown RBP9.75□□□□□ -0.85
LIG1-212ENST00000596549 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 NDUFA4O00483 81 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 UCP1P25874 307 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 AKR1C2P52895 323 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 SP6Q3SY56 376 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 SCGB2B2Q4G0G5 96 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 Q56UQ5 140 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 ZFAND6Q6FIF0 208 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 OR52B4Q8NGK2 314 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 OR1L6Q8NGR2 347 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 MARCH1Q8TCQ1 289 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 RAB2BQ8WUD1 216 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
LIG1-212ENST00000596549 DAZ1Q9NQZ3 744 aaKnown RBP9.75□□□□□ -0.85
LIG1-212ENST00000596549 TRAV25A0A0B4J276 109 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 A0A0B4J293 547 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
LIG1-212ENST00000596549 MT-CO2P00403 227 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 CTSDP07339 412 aaPredicted RBP9.74□□□□□ -0.85
LIG1-212ENST00000596549 CTSGP08311 255 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 LYL1P12980 280 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 FCGR2BP31994 310 aaPredicted RBP9.74□□□□□ -0.85
LIG1-212ENST00000596549 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
LIG1-212ENST00000596549 MRPS10P82664 201 aaKnown RBP9.74□□□□□ -0.85
LIG1-212ENST00000596549 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 OR4C16Q8NGL9 310 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 TERB2Q8NHR7 220 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 LHFPL5Q8TAF8 219 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 C15orf40Q8WUR7 153 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 C5orf66Q9H5L9 145 aa9.74□□□□□ -0.85
LIG1-212ENST00000596549 GAR1Q9NY12 217 aaKnown RBP9.74□□□□□ -0.85
LIG1-212ENST00000596549 INS-IGF2F8WCM5 200 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 H3BMQ9 156 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 CTDSPLO15194 276 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms