RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 C7orf66A4D0T2 115 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 ACTL6BO94805 426 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 ATG12O94817 140 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 PTTG1O95997 202 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 DEFA1P59665 94 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 DEFA3P59666 94 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 RUNX1Q01196 453 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 ID3Q02535 119 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 SMCO1Q147U7 214 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 OXA1LQ15070 435 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 OR4X2Q8NGF9 303 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 RAX2Q96IS3 184 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 TMED3Q9Y3Q3 217 aa8.17□□□□□ -1.1
LIG1-210ENST00000596332 A0A1W2PRX2 142 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 F8W735 103 aaPredicted RBP8.16□□□□□ -1.1
LIG1-210ENST00000596332 NXPH3O95157 252 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 SULT1A3P0DMM9 295 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 SULT1A4P0DMN0 295 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 RNASE2P10153 161 aaKnown RBP8.16□□□□□ -1.1
LIG1-210ENST00000596332 SPCS3P61009 180 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 RHOGP84095 191 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 TNFRSF9Q07011 255 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 NSUN5P1Q3KNT7 163 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
LIG1-210ENST00000596332 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
LIG1-210ENST00000596332 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 PLET1Q6UQ28 207 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 C12orf45Q8N5I9 185 aaPredicted RBP8.16□□□□□ -1.1
LIG1-210ENST00000596332 ZNF114Q8NC26 417 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 PHB2Q99623 299 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 HINT2Q9BX68 163 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
LIG1-210ENST00000596332 F11RQ9Y624 299 aaKnown RBP8.16□□□□□ -1.1
LIG1-210ENST00000596332 MFSD2BA6NFX1 497 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 SNRPGP15A8MWD9 76 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 K7EIM0 57 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 CCSO14618 274 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 OR2J3O76001 311 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 TMEM50AO95807 157 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 TRBV12-3P01733 135 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 TRGV3P03979 118 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 BCAP31P51572 246 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 PAX9P55771 341 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 FHL3Q13643 280 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 MLANAQ16655 118 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 DEFB136Q30KP8 78 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 PRR31Q5SQ13 230 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 HSD17B13Q7Z5P4 300 aaPredicted RBP8.15□□□□□ -1.1
LIG1-210ENST00000596332 COQ8AQ8NI60 647 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 C4orf3Q8WVX3 66 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 DUX3Q96PT4 197 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 RBKSQ9H477 322 aa8.15□□□□□ -1.1
LIG1-210ENST00000596332 PAIP2BQ9ULR5 123 aaKnown RBP8.15□□□□□ -1.1
LIG1-210ENST00000596332 WNK1Q9H4A3 2382 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 I3L2K1 104 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 PRAF2O60831 178 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 IFNA17P01571 189 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 IGHV3-11P01762 117 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 TPPP2P59282 170 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 TMEM65Q6PI78 240 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 ZBTB8BQ8NAP8 495 aaPredicted RBP8.14□□□□□ -1.11
LIG1-210ENST00000596332 NECAP1Q8NC96 275 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 WFDC9Q8NEX5 89 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 OR1P1Q8NH06 330 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 OR5B12Q96R08 314 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
LIG1-210ENST00000596332 MRPL36Q9P0J6 103 aaKnown RBP8.14□□□□□ -1.11
LIG1-210ENST00000596332 FBXL7Q9UJT9 491 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 S4R3C0 116 aa8.14□□□□□ -1.11
LIG1-210ENST00000596332 IGHV4OR15-8A0A075B7B6 117 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 A0A087WW49 117 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 FAM90A26D6RGX4 464 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 SIX6O95475 246 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
LIG1-210ENST00000596332 H2BFSP57053 126 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 TATDN3Q17R31 274 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 C15orf32Q32M92 178 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 LINC00482Q8N8I6 264 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 KLHL30-AS1Q8NEE0 82 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 RNASE11Q8TAA1 199 aaKnown RBP8.13□□□□□ -1.11
LIG1-210ENST00000596332 ZNF502Q8TBZ5 544 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 USMG5Q96IX5 58 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 PLEKHA3Q9HB20 300 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 ZNF355PQ9NSJ1 428 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 ALG5Q9Y673 324 aa8.13□□□□□ -1.11
LIG1-210ENST00000596332 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.12□□□□□ -1.11
LIG1-210ENST00000596332 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 C15orf62A8K5M9 175 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 PMS2P5A8MQ11 134 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 PRSS46E5RG02 174 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 CCL24O00175 119 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 BMPR1BO00238 502 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 DHFRP00374 187 aa8.12□□□□□ -1.11
LIG1-210ENST00000596332 MBPP02686 304 aaPredicted RBP8.12□□□□□ -1.11
LIG1-210ENST00000596332 HIST1H1BP16401 226 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms