RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 IFNA17P01571 189 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 P0C879 139 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 TMEM268Q5VZI3 342 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 C19orf35Q6ZS72 473 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 SELENOHQ8IZQ5 122 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 C7orf50Q9BRJ6 194 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 PLEKHA3Q9HB20 300 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 CACFD1Q9UGQ2 172 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 F11RQ9Y624 299 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 TMEM56-RWDD3S4R434 201 aa13.28□□□□□ -0.28
SHKBP1-212ENST00000596163 A0A0B4J293 547 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 TMEM187Q14656 261 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 TMED4Q7Z7H5 227 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 SLC35G3Q8N808 338 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 VN1R17PQ8TDU5 208 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 AURKAIP1Q9NWT8 199 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-212ENST00000596163 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 PRB2P02812 416 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 KRTAP10-11P60412 298 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 CNPY1Q3B7I2 92 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 LGI3Q8N145 548 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 OR2C3Q8N628 320 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 OR1P1Q8NH06 330 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 S100ZQ8WXG8 99 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 PEMTQ9UBM1 199 aa13.26□□□□□ -0.29
SHKBP1-212ENST00000596163 BMPR1BO00238 502 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 ST8SIA3O43173 380 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 IL7P13232 177 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 SNCAP37840 140 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 CLEC19AQ6UXS0 136 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 OR9G4Q8NGQ1 327 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 LHFPL5Q8TAF8 219 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 MRAPQ8TCY5 172 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 ATP6V0BQ99437 205 aa13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 SDHCQ99643 169 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-212ENST00000596163 A0A0B4J2A0 478 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 CLEC3BP05452 202 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 ARL3P36405 182 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 SPCS3P61009 180 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 DCTN2Q13561 401 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 OR52E5Q8NH55 327 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 GAR1Q9NY12 217 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 SHPKQ9UHJ6 478 aa13.24□□□□□ -0.29
SHKBP1-212ENST00000596163 A0A0G2JRQ6 117 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 LINC00854A0A1B0GVQ3 168 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 IGHV3-23P01764 117 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 VAMP1P23763 118 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 UBE2MP61081 183 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 SUPT4H1P63272 117 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 GPR146Q96CH1 333 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 S4R3C0 116 aa13.23□□□□□ -0.29
SHKBP1-212ENST00000596163 DUXBA0A1W2PPF3 345 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 MFSD2BA6NFX1 497 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 PPP5D1E7EU14 171 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 NDUFB6O95139 128 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 OR2C1O95371 312 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 SULT1A3P0DMM9 295 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 SULT1A4P0DMN0 295 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 CCR6P51684 374 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 AARDQ4LEZ3 155 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 Q6ZRM9 215 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 CCDC140Q96MF4 163 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 SIGLEC8Q9NYZ4 499 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-212ENST00000596163 MFAP2P55001 183 aa13.21□□□□□ -0.29
SHKBP1-212ENST00000596163 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
SHKBP1-212ENST00000596163 DEFB121Q5J5C9 76 aa13.21□□□□□ -0.29
SHKBP1-212ENST00000596163 MISP3Q96FF7 219 aa13.21□□□□□ -0.29
SHKBP1-212ENST00000596163 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
SHKBP1-212ENST00000596163 LGALS9O00182 355 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 CORTO00230 105 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 SFT2D2O95562 160 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 LY86O95711 162 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 GPR183P32249 361 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms