RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MARCH11A6NNE9 402 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 IGLL5B9A064 214 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 CA1P00915 261 aaPredicted RBP7.26□□□□□ -1.25
LIG1-209ENST00000596104 FCER2P06734 321 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 GNRHRP30968 328 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 ERVK-16P61578 105 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 RELQ04864 619 aaPredicted RBP7.26□□□□□ -1.25
LIG1-209ENST00000596104 TMEM187Q14656 261 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 AADACL3Q5VUY0 350 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 SFXN4Q6P4A7 337 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 TMEM17Q86X19 198 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 GBGT1Q8N5D6 347 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 Q8NAQ8 132 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 OR5H6Q8NGV6 325 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 DGCR14Q96DF8 476 aaKnown RBP7.26□□□□□ -1.25
LIG1-209ENST00000596104 HINT2Q9BX68 163 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 HRH4Q9H3N8 390 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 NSG2Q9Y328 171 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 RRP15Q9Y3B9 282 aaKnown RBP7.26□□□□□ -1.25
LIG1-209ENST00000596104 OR51B2Q9Y5P1 312 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 DNAH6Q9C0G6 4158 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 IGHV3OR16-13A0A075B7E8 117 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 IGHV3-74A0A0B4J1X5 117 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 DBX1A6NMT0 343 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 C15orf61A6NNL5 157 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 C11orf94C9JXX5 98 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 I3L2K1 104 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 NUPL2O15504 423 aaKnown RBP7.25□□□□□ -1.25
LIG1-209ENST00000596104 MRPS14O60783 128 aaKnown RBP7.25□□□□□ -1.25
LIG1-209ENST00000596104 GIG44P09565 113 aaPredicted RBP7.25□□□□□ -1.25
LIG1-209ENST00000596104 F2RP25116 425 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 LINC00336Q6ZUF6 198 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 TPRA1Q86W33 373 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 OR5AP2Q8NGF4 316 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 OR1P1Q8NH06 330 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 FCAMRQ8WWV6 532 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 NXF2Q9GZY0 626 aaKnown RBP7.25□□□□□ -1.25
LIG1-209ENST00000596104 AUNIPQ9H7T9 357 aa7.25□□□□□ -1.25
LIG1-209ENST00000596104 TRAV14DV4A0A0A6YYC5 116 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 A0A0A6YYH2 397 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 A6NJ64 397 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 PGLYRP1O75594 196 aaPredicted RBP7.24□□□□□ -1.25
LIG1-209ENST00000596104 YIF1AO95070 293 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 KRASP01116 189 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 RLN1P04808 185 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 RBMY1A1P0DJD3 496 aaKnown RBP7.24□□□□□ -1.25
LIG1-209ENST00000596104 RBMY1CP0DJD4 496 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 G6PCP35575 357 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 LPAR6P43657 344 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 MFAP4P55083 255 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 SCAND1P57086 179 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 DEFB131AP59861 70 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 RBMY1FQ15415 496 aaKnown RBP7.24□□□□□ -1.25
LIG1-209ENST00000596104 UBE2UQ5VVX9 321 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 LEMD1Q68G75 181 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 TCF24Q7RTU0 167 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 FAM24BQ8N5W8 94 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 SLC25A46Q96AG3 418 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 CMTM3Q96MX0 182 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 TXN2Q99757 166 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 TMEM14BQ9NUH8 114 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 PRNDQ9UKY0 176 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 BLOC1S6Q9UL45 172 aa7.24□□□□□ -1.25
LIG1-209ENST00000596104 TRAV2A0A0B4J234 112 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 IGHV4-28A0A0C4DH34 117 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 ANKRD65E5RJM6 399 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 XRCC3O43542 346 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 SNAPC5O75971 98 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 DFFBO76075 338 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 IGHV3-48P01763 117 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 APOHP02749 345 aaPredicted RBP7.23□□□□□ -1.25
LIG1-209ENST00000596104 CD5P06127 495 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 CLEC2LP0C7M8 214 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 SDC2P34741 201 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 HERV-K104P61576 105 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 PAFAH1B2P68402 229 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 DHRS11Q6UWP2 260 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 TOMM20LQ6UXN7 152 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 Q6ZTC4 211 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 ST8SIA2Q92186 375 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 BORCS5Q969J3 196 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 MOB3AQ96BX8 217 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 MISP3Q96FF7 219 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 TMEM56Q96MV1 263 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 MS4A6AQ9H2W1 248 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 FKBP11Q9NYL4 201 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 FAT2Q9NYQ8 4349 aa7.23□□□□□ -1.25
LIG1-209ENST00000596104 IGHV4-4A0A075B6R2 117 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 ZNF705EA8MWA4 302 aaPredicted RBP7.22□□□□□ -1.25
LIG1-209ENST00000596104 MT-CO2P00403 227 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 MED14OSP0DP75 135 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 PSMB9P28065 219 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 CBX5P45973 191 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 TRPT1Q86TN4 253 aaKnown RBP7.22□□□□□ -1.25
LIG1-209ENST00000596104 ZNF114Q8NC26 417 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 CNBD2Q96M20 576 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 TSC22D3Q99576 134 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms