RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
TRIM28-206ENST00000595974 RTBDNQ9BSG5 229 aaPredicted RBP12.33□□□□□ -0.44
TRIM28-206ENST00000595974 C5orf66Q9H5L9 145 aa12.33□□□□□ -0.44
TRIM28-206ENST00000595974 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
TRIM28-206ENST00000595974 V9GYH0 126 aa12.33□□□□□ -0.44
TRIM28-206ENST00000595974 OR2C1O95371 312 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 GPR183P32249 361 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 AP3S2P59780 193 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 HSPE1P61604 102 aaKnown RBP12.32□□□□□ -0.44
TRIM28-206ENST00000595974 SP6Q3SY56 376 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 FAM106AQ4KMX7 169 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 OR1P1Q8NH06 330 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 TRIM63Q969Q1 353 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 ATP6V0BQ99437 205 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 THAP7Q9BT49 309 aaPredicted RBP12.32□□□□□ -0.44
TRIM28-206ENST00000595974 TMEM222Q9H0R3 208 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 NAA60Q9H7X0 242 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 GPR132Q9UNW8 380 aa12.32□□□□□ -0.44
TRIM28-206ENST00000595974 TEX13DA0A0J9YY54 714 aaPredicted RBP12.31□□□□□ -0.44
TRIM28-206ENST00000595974 CRYM-AS1A6NIL9 109 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 C2orf70A6NJV1 201 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 A8MWP6 167 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 CLEC3BP05452 202 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 FAUP35544 74 aaKnown RBP12.31□□□□□ -0.44
TRIM28-206ENST00000595974 MFAP2P55001 183 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 PYDC2Q56P42 97 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 CCDC190Q86UF4 302 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 FAM219AQ8IW50 185 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
TRIM28-206ENST00000595974 SCGB3A2Q96PL1 93 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 MCUBQ9NWR8 336 aa12.31□□□□□ -0.44
TRIM28-206ENST00000595974 CDS2O95674 445 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 NHLRC4P0CG21 123 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-206ENST00000595974 DHODHQ02127 395 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 ZNF79Q15937 498 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
TRIM28-206ENST00000595974 DYNLRB2Q8TF09 96 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 DEDD2Q8WXF8 326 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 RBPMSQ93062 196 aaKnown RBP12.3□□□□□ -0.44
TRIM28-206ENST00000595974 BSCL2Q96G97 398 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-206ENST00000595974 PDCD10Q9BUL8 212 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 C21orf62Q9NYP8 219 aa12.3□□□□□ -0.44
TRIM28-206ENST00000595974 A0A0B4J293 547 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 INS-IGF2F8WCM5 200 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 K7EIM0 57 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 TGOLN2O43493 480 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 FOLR2P14207 255 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 ERHP84090 104 aaKnown RBP12.29□□□□□ -0.44
TRIM28-206ENST00000595974 KLF9Q13886 244 aaPredicted RBP12.29□□□□□ -0.44
TRIM28-206ENST00000595974 SPANXN2Q5MJ10 180 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 PLET1Q6UQ28 207 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 SGPP2Q8IWX5 399 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 SLC35G3Q8N808 338 aa12.29□□□□□ -0.44
TRIM28-206ENST00000595974 A0A0G2JRQ6 117 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 TMEM213A2RRL7 107 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 IFNA17P01571 189 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 ETV6P41212 452 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 GTSCR1Q86UQ5 136 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 LHFPL5Q8TAF8 219 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 SCARB1Q8WTV0 552 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 PALMDQ9NP74 551 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
TRIM28-206ENST00000595974 GAR1Q9NY12 217 aaKnown RBP12.28□□□□□ -0.44
TRIM28-206ENST00000595974 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
TRIM28-206ENST00000595974 ZNF320A2RRD8 509 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 CD300EQ496F6 205 aaPredicted RBP12.27□□□□□ -0.45
TRIM28-206ENST00000595974 AARDQ4LEZ3 155 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 TMEM268Q5VZI3 342 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 Q8N1Y9 231 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 IL22RA2Q969J5 263 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 TMEM230Q96A57 120 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 MISP3Q96FF7 219 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 ZNF436Q9C0F3 470 aaPredicted RBP12.27□□□□□ -0.45
TRIM28-206ENST00000595974 KCNIP3Q9Y2W7 256 aa12.27□□□□□ -0.45
TRIM28-206ENST00000595974 IGHV3-21A0A0B4J1V1 117 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 IZUMO1RA6ND01 250 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 F8W735 103 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-206ENST00000595974 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 EDN2P20800 178 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 CBLN1P23435 193 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 FCGR2BP31994 310 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-206ENST00000595974 SNCAP37840 140 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-206ENST00000595974 ELLP55199 621 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-206ENST00000595974 DEFB114Q30KQ6 69 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 Q56UQ5 140 aa12.26□□□□□ -0.45
TRIM28-206ENST00000595974 SPINK9Q5DT21 86 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms