RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 OR2C3Q8N628 320 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 FUNDC2Q9BWH2 189 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 PRNDQ9UKY0 176 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 M0QYG6 137 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 IGKV1-39P01597 117 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 IGHV3-48P01763 117 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 IGKV1D-39P04432 117 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 ELK1P19419 428 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 SLC38A6Q8IZM9 456 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 TMEM56Q96MV1 263 aa12.68□□□□□ -0.38
CCDC9-202ENST00000595659 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
CCDC9-202ENST00000595659 PLECQ15149 4684 aaKnown RBP12.67□□□□□ -0.38
CCDC9-202ENST00000595659 C15orf61A6NNL5 157 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 NDUFA4O00483 81 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 APOA1P02647 267 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 SPSB3Q6PJ21 355 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 OR4A16Q8NH70 328 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 MISP3Q96FF7 219 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 SPAG8Q99932 426 aaPredicted RBP12.67□□□□□ -0.38
CCDC9-202ENST00000595659 TMEM14BQ9NUH8 114 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 FKBP11Q9NYL4 201 aa12.67□□□□□ -0.38
CCDC9-202ENST00000595659 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 TSPAN4O14817 238 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 JTBO76095 146 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 CTSGP08311 255 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 S100GP29377 79 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 LAMTOR1Q6IAA8 161 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 LPCAT3Q6P1A2 487 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 H2BFWTQ7Z2G1 175 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 MRGPRFQ96AM1 343 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 TSC22D3Q99576 134 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 SCPEP1Q9HB40 452 aa12.66□□□□□ -0.38
CCDC9-202ENST00000595659 FAM25AB3EWG3 89 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 FAM25CB3EWG5 89 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 FAM25GB3EWG6 89 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 YIF1AO95070 293 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 CTSDP07339 412 aaPredicted RBP12.65□□□□□ -0.38
CCDC9-202ENST00000595659 RPL35AP18077 110 aaKnown RBP12.65□□□□□ -0.38
CCDC9-202ENST00000595659 PI3P19957 117 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 RCVRNP35243 200 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 CADM3Q8N126 398 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 OR1P1Q8NH06 330 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 PINX1Q96BK5 328 aaKnown RBP12.65□□□□□ -0.38
CCDC9-202ENST00000595659 ZNF414Q96IQ9 312 aa12.65□□□□□ -0.38
CCDC9-202ENST00000595659 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 A0A0J9YWU9 116 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 I3L2K1 104 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 PGAM2P15259 253 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 TFPI2P48307 235 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 UCP3P55916 312 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 EWSR1Q01844 656 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC9-202ENST00000595659 DEFB135Q30KP9 77 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 ODF3L2Q3SX64 289 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 NAA50Q9GZZ1 169 aaKnown RBP12.64□□□□□ -0.39
CCDC9-202ENST00000595659 SMPXQ9UHP9 88 aa12.64□□□□□ -0.39
CCDC9-202ENST00000595659 K7EMT4 169 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 NUPL2O15504 423 aaKnown RBP12.63□□□□□ -0.39
CCDC9-202ENST00000595659 MT-CO2P00403 227 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 RORCP51449 518 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 APOC4P55056 127 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 MFAP4P55083 255 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 APRG1Q8IVJ8 170 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 CMTM3Q96MX0 182 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 RNF2Q99496 336 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 KLK11Q9UBX7 282 aa12.63□□□□□ -0.39
CCDC9-202ENST00000595659 CXorf65A6NEN9 183 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 SPRY2O43597 315 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 HSPE1P61604 102 aaKnown RBP12.62□□□□□ -0.39
CCDC9-202ENST00000595659 PRCDQ00LT1 54 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 ZNF124Q15973 351 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 TMEM116Q8NCL8 245 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 OR52I2Q8NH67 350 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 RHPN1-AS1Q9BWJ2 59 aa12.62□□□□□ -0.39
CCDC9-202ENST00000595659 FAM212BQ9NTI7 297 aaPredicted RBP12.62□□□□□ -0.39
CCDC9-202ENST00000595659 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
CCDC9-202ENST00000595659 CHEK1O14757 476 aa12.61□□□□□ -0.39
CCDC9-202ENST00000595659 CD3DP04234 171 aa12.61□□□□□ -0.39
CCDC9-202ENST00000595659 ERHP84090 104 aaKnown RBP12.61□□□□□ -0.39
CCDC9-202ENST00000595659 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
CCDC9-202ENST00000595659 MZT2AQ6P582 158 aa12.61□□□□□ -0.39
CCDC9-202ENST00000595659 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
CCDC9-202ENST00000595659 GBGT1Q8N5D6 347 aa12.61□□□□□ -0.39
CCDC9-202ENST00000595659 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 PIGPP57054 158 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 SP6Q3SY56 376 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 RNASE10Q5GAN6 216 aaKnown RBP12.6□□□□□ -0.39
CCDC9-202ENST00000595659 Q6ZWC4 215 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms