RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DHFRP00374 187 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 TMEM128Q5BJH2 165 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 LYZL2Q7Z4W2 148 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 ZNF429Q86V71 674 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 CENPSQ8N2Z9 138 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 CCDC140Q96MF4 163 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 C7orf50Q9BRJ6 194 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 RANGRFQ9HD47 186 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 IGHV3-21A0A0B4J1V1 117 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 CENPXA8MT69 81 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 BMPR1BO00238 502 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 OVOL1O14753 267 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 LYRM1O43325 122 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 IFNA17P01571 189 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 HIST1H1BP16401 226 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 KLK9Q2XQG4 91 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 HSD17B13Q7Z5P4 300 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 OR2C3Q8N628 320 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 KLK9Q9UKQ9 250 aa10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 F11RQ9Y624 299 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-207ENST00000595631 SFT2D2O95562 160 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 HLA-AP01891 365 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 ANXA3P12429 323 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 KRTAP10-11P60412 298 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 ZNF846Q147U1 533 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 CLEC19AQ6UXS0 136 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 FAM219AQ8IW50 185 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 LGI3Q8N145 548 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 ZC4H2Q9NQZ6 224 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 TBC1D24Q9ULP9 559 aa10.57□□□□□ -0.72
SHKBP1-207ENST00000595631 DUS4LO95620 317 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 ZP3P21754 424 aa10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 SYNJ2BPP57105 145 aa10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 NMSQ5H8A3 153 aa10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 EEF1AKMT3Q96AZ1 226 aa10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 PDCD10Q9BUL8 212 aa10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 WDR12Q9GZL7 423 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-207ENST00000595631 A0A0B4J2A0 478 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 C9orf170A2RU37 121 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 SULT1A3P0DMM9 295 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 SULT1A4P0DMN0 295 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 SRPXP78539 464 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 IFITM3Q01628 133 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 AARDQ4LEZ3 155 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 HAPLN4Q86UW8 402 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 C20orf85Q9H1P6 137 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
SHKBP1-207ENST00000595631 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 K7EIM0 57 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 UPK1BO75841 260 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 OR2C1O95371 312 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 IGHV3-48P01763 117 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 OR4E1P0C645 316 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 GPR183P32249 361 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 ARL3P36405 182 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 SPCS3P61009 180 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 ERHP84090 104 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 DHRS2Q13268 280 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 ZNF114Q8NC26 417 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 OR52B4Q8NGK2 314 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 OR1P1Q8NH06 330 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 CXorf58Q96LI9 332 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 MEGF8Q7Z7M0 2845 aa10.54□□□□□ -0.72
SHKBP1-207ENST00000595631 CYB5BO43169 146 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 SAP30O75446 220 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 TCRBP04435 133 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 HOXB5P09067 269 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 RNASE2P10153 161 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 EDN2P20800 178 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 UBE2MP61081 183 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 EGFEM1PQ0D2K5 195 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 SMCO1Q147U7 214 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 C4orf46Q504U0 113 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 LYG2Q86SG7 212 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 VN1R17PQ8TDU5 208 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
SHKBP1-207ENST00000595631 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms