RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MFAP2P55001 183 aa16.77■□□□□ 0.28
SSBP4-203ENST00000593641 FCAMRQ8WWV6 532 aa16.77■□□□□ 0.28
SSBP4-203ENST00000593641 DGCR14Q96DF8 476 aaKnown RBP16.77■□□□□ 0.28
SSBP4-203ENST00000593641 TMEM56Q96MV1 263 aa16.77■□□□□ 0.28
SSBP4-203ENST00000593641 PRNDQ9UKY0 176 aa16.77■□□□□ 0.28
SSBP4-203ENST00000593641 K7EIM0 57 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 CTSDP07339 412 aaPredicted RBP16.76■□□□□ 0.27
SSBP4-203ENST00000593641 G6PCP35575 357 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 LPAR6P43657 344 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 RFX2P48378 723 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 DHRS11Q6UWP2 260 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 OR5B3Q8NH48 314 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 S100A16Q96FQ6 103 aaKnown RBP16.76■□□□□ 0.27
SSBP4-203ENST00000593641 FKBP11Q9NYL4 201 aa16.76■□□□□ 0.27
SSBP4-203ENST00000593641 F8W735 103 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-203ENST00000593641 ADMP35318 185 aa16.75■□□□□ 0.27
SSBP4-203ENST00000593641 TAS2R46P59540 309 aa16.75■□□□□ 0.27
SSBP4-203ENST00000593641 RELQ04864 619 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-203ENST00000593641 CADM3Q8N126 398 aa16.75■□□□□ 0.27
SSBP4-203ENST00000593641 OR5H2Q8NGV7 314 aa16.75■□□□□ 0.27
SSBP4-203ENST00000593641 TSC22D3Q99576 134 aa16.75■□□□□ 0.27
SSBP4-203ENST00000593641 MAP6D1Q9H9H5 199 aa16.75■□□□□ 0.27
SSBP4-203ENST00000593641 GPR31O00270 319 aa16.74■□□□□ 0.27
SSBP4-203ENST00000593641 NUPL2O15504 423 aaKnown RBP16.74■□□□□ 0.27
SSBP4-203ENST00000593641 PMP2P02689 132 aa16.74■□□□□ 0.27
SSBP4-203ENST00000593641 NEDD8Q15843 81 aa16.74■□□□□ 0.27
SSBP4-203ENST00000593641 TMEM69Q5SWH9 247 aa16.74■□□□□ 0.27
SSBP4-203ENST00000593641 CROCCP3Q8IVE0 287 aa16.74■□□□□ 0.27
SSBP4-203ENST00000593641 SMPXQ9UHP9 88 aa16.74■□□□□ 0.27
SSBP4-203ENST00000593641 YIF1AO95070 293 aa16.73■□□□□ 0.27
SSBP4-203ENST00000593641 UBE2NLQ5JXB2 153 aa16.73■□□□□ 0.27
SSBP4-203ENST00000593641 APRG1Q8IVJ8 170 aa16.73■□□□□ 0.27
SSBP4-203ENST00000593641 OR1P1Q8NH06 330 aa16.73■□□□□ 0.27
SSBP4-203ENST00000593641 RNF2Q99496 336 aa16.73■□□□□ 0.27
SSBP4-203ENST00000593641 ANAPC10Q9UM13 185 aa16.73■□□□□ 0.27
SSBP4-203ENST00000593641 IGHV7-4-1A0A0J9YVY3 117 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 CTSGP08311 255 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 S100GP29377 79 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 CMC4P56277 68 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-203ENST00000593641 TMEM116Q8NCL8 245 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 OR6F1Q8NGZ6 308 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 PHLDA1Q8WV24 401 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-203ENST00000593641 MISP3Q96FF7 219 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 CMTM3Q96MX0 182 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 RHPN1-AS1Q9BWJ2 59 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 FXYD6Q9H0Q3 95 aa16.72■□□□□ 0.27
SSBP4-203ENST00000593641 C15orf61A6NNL5 157 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 CHEK1O14757 476 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 FCGR2BP31994 310 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-203ENST00000593641 TFPI2P48307 235 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 TAS2R20P59543 309 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 SLC25A46Q96AG3 418 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 CSTL1Q9H114 145 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 TMEM14BQ9NUH8 114 aa16.71■□□□□ 0.27
SSBP4-203ENST00000593641 MPTX1A8MV57 137 aa16.7■□□□□ 0.26
SSBP4-203ENST00000593641 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
SSBP4-203ENST00000593641 MFAP4P55083 255 aa16.7■□□□□ 0.26
SSBP4-203ENST00000593641 PHLDA2Q53GA4 152 aa16.7■□□□□ 0.26
SSBP4-203ENST00000593641 SAMD12Q8N8I0 201 aa16.7■□□□□ 0.26
SSBP4-203ENST00000593641 IGKV3-7A0A075B6H7 116 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 IGHV3-49A0A0A0MS15 119 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 DBX1A6NMT0 343 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 NAT1P18440 290 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 OR4A16Q8NH70 328 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 GATAD1Q8WUU5 269 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 OR10C1Q96KK4 312 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 TXN2Q99757 166 aa16.69■□□□□ 0.26
SSBP4-203ENST00000593641 TRAV14DV4A0A0A6YYC5 116 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 PRSS3P35030 304 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 HRH1P35367 487 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 TSPAN5P62079 268 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 ZNF124Q15973 351 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 LPCAT3Q6P1A2 487 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 RARRES2Q99969 163 aa16.68■□□□□ 0.26
SSBP4-203ENST00000593641 FAM212BQ9NTI7 297 aaPredicted RBP16.68■□□□□ 0.26
SSBP4-203ENST00000593641 I3L2K1 104 aa16.67■□□□□ 0.26
SSBP4-203ENST00000593641 GNG7O60262 68 aa16.67■□□□□ 0.26
SSBP4-203ENST00000593641 EIF4EP06730 217 aaKnown RBP16.67■□□□□ 0.26
SSBP4-203ENST00000593641 HLA-DMAP28067 261 aa16.67■□□□□ 0.26
SSBP4-203ENST00000593641 PAFAH1B2P68402 229 aa16.67■□□□□ 0.26
SSBP4-203ENST00000593641 H2BFWTQ7Z2G1 175 aa16.67■□□□□ 0.26
SSBP4-203ENST00000593641 RPP25LQ8N5L8 163 aaKnown RBP16.67■□□□□ 0.26
SSBP4-203ENST00000593641 PINX1Q96BK5 328 aaKnown RBP16.67■□□□□ 0.26
SSBP4-203ENST00000593641 GINS3Q9BRX5 216 aa16.67■□□□□ 0.26
SSBP4-203ENST00000593641 NXF2Q9GZY0 626 aaKnown RBP16.67■□□□□ 0.26
SSBP4-203ENST00000593641 DNAH10Q8IVF4 4471 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 MT-CO2P00403 227 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 TGFBR1P36897 503 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 PRCDQ00LT1 54 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 LGALS9CQ6DKI2 356 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 TBC1D26Q86UD7 250 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 GBGT1Q8N5D6 347 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 ZNF114Q8NC26 417 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 MFFQ9GZY8 342 aa16.66■□□□□ 0.26
SSBP4-203ENST00000593641 IGHV3OR16-13A0A075B7E8 117 aa16.65■□□□□ 0.26
SSBP4-203ENST00000593641 IGHV3-74A0A0B4J1X5 117 aa16.65■□□□□ 0.26
SSBP4-203ENST00000593641 CD5P06127 495 aa16.65■□□□□ 0.26
SSBP4-203ENST00000593641 KCTD21Q4G0X4 260 aa16.65■□□□□ 0.26
SSBP4-203ENST00000593641 ZNF414Q96IQ9 312 aa16.65■□□□□ 0.26
SSBP4-203ENST00000593641 SEC22AQ96IW7 307 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms