RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CROCCP3Q8IVE0 287 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 CMTM1Q8IZ96 169 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 STPG3Q8N7X2 389 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 RNF183Q96D59 192 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 PRNDQ9UKY0 176 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 PMP2P02689 132 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 NAT1P18440 290 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 TAS2R46P59540 309 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 UBE2NLQ5JXB2 153 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 UBAC2Q8NBM4 344 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 TSPAN14Q8NG11 270 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 OR5H2Q8NGV7 314 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 OR5B3Q8NH48 314 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 TMEM56Q96MV1 263 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 FXYD6Q9H0Q3 95 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 FKBP11Q9NYL4 201 aa17.7■□□□□ 0.42
LSM4-202ENST00000593564 IGHV3OR16-8A0A075B7F1 116 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 GPR31O00270 319 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 ZNF207O43670 478 aaKnown RBP17.69■□□□□ 0.42
LSM4-202ENST00000593564 CTSDP07339 412 aaPredicted RBP17.69■□□□□ 0.42
LSM4-202ENST00000593564 TAS2R20P59543 309 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 Q56UQ5 140 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 TMEM69Q5SWH9 247 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 GALNT14Q96FL9 552 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 TMEM14BQ9NUH8 114 aa17.69■□□□□ 0.42
LSM4-202ENST00000593564 CTSGP08311 255 aa17.68■□□□□ 0.42
LSM4-202ENST00000593564 TMEM217Q8N7C4 229 aa17.68■□□□□ 0.42
LSM4-202ENST00000593564 OR1P1Q8NH06 330 aa17.68■□□□□ 0.42
LSM4-202ENST00000593564 TSC22D3Q99576 134 aa17.68■□□□□ 0.42
LSM4-202ENST00000593564 MAP6D1Q9H9H5 199 aa17.68■□□□□ 0.42
LSM4-202ENST00000593564 SMPXQ9UHP9 88 aa17.68■□□□□ 0.42
LSM4-202ENST00000593564 DBX1A6NMT0 343 aa17.67■□□□□ 0.42
LSM4-202ENST00000593564 RPL35AP18077 110 aaKnown RBP17.67■□□□□ 0.42
LSM4-202ENST00000593564 RELQ04864 619 aaPredicted RBP17.67■□□□□ 0.42
LSM4-202ENST00000593564 KCTD21Q4G0X4 260 aa17.67■□□□□ 0.42
LSM4-202ENST00000593564 OR6F1Q8NGZ6 308 aa17.67■□□□□ 0.42
LSM4-202ENST00000593564 ZNF414Q96IQ9 312 aa17.67■□□□□ 0.42
LSM4-202ENST00000593564 KLK5Q9Y337 293 aaPredicted RBP17.67■□□□□ 0.42
LSM4-202ENST00000593564 KMT2AQ03164 3969 aa17.67■□□□□ 0.42
LSM4-202ENST00000593564 FRAS1Q86XX4 4008 aa17.66■□□□□ 0.42
LSM4-202ENST00000593564 C15orf61A6NNL5 157 aa17.66■□□□□ 0.42
LSM4-202ENST00000593564 TGFBR1P36897 503 aa17.66■□□□□ 0.42
LSM4-202ENST00000593564 SAMD12Q8N8I0 201 aa17.66■□□□□ 0.42
LSM4-202ENST00000593564 RNF2Q99496 336 aa17.66■□□□□ 0.42
LSM4-202ENST00000593564 C6orf62Q9GZU0 229 aaPredicted RBP17.66■□□□□ 0.42
LSM4-202ENST00000593564 FAM212BQ9NTI7 297 aaPredicted RBP17.66■□□□□ 0.42
LSM4-202ENST00000593564 IGHV7-4-1A0A0J9YVY3 117 aa17.65■□□□□ 0.42
LSM4-202ENST00000593564 NUPL2O15504 423 aaKnown RBP17.65■□□□□ 0.42
LSM4-202ENST00000593564 FCGR2BP31994 310 aaPredicted RBP17.65■□□□□ 0.42
LSM4-202ENST00000593564 OR10C1Q96KK4 312 aa17.65■□□□□ 0.42
LSM4-202ENST00000593564 RHPN1-AS1Q9BWJ2 59 aa17.65■□□□□ 0.42
LSM4-202ENST00000593564 I3L2K1 104 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 CHEK1O14757 476 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 PRSS3P35030 304 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 HRH1P35367 487 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 RPS19P39019 145 aaKnown RBP17.64■□□□□ 0.41
LSM4-202ENST00000593564 PHLDA2Q53GA4 152 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 LYSMD2Q8IV50 215 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 APRG1Q8IVJ8 170 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 TMEM116Q8NCL8 245 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 TXN2Q99757 166 aa17.64■□□□□ 0.41
LSM4-202ENST00000593564 S100GP29377 79 aa17.63■□□□□ 0.41
LSM4-202ENST00000593564 MFAP4P55083 255 aa17.63■□□□□ 0.41
LSM4-202ENST00000593564 CMC4P56277 68 aaPredicted RBP17.63■□□□□ 0.41
LSM4-202ENST00000593564 LPCAT3Q6P1A2 487 aa17.63■□□□□ 0.41
LSM4-202ENST00000593564 ZNF114Q8NC26 417 aa17.63■□□□□ 0.41
LSM4-202ENST00000593564 SLC25A46Q96AG3 418 aa17.63■□□□□ 0.41
LSM4-202ENST00000593564 MISP3Q96FF7 219 aa17.63■□□□□ 0.41
LSM4-202ENST00000593564 DNAH10Q8IVF4 4471 aa17.62■□□□□ 0.41
LSM4-202ENST00000593564 YIF1AO95070 293 aa17.62■□□□□ 0.41
LSM4-202ENST00000593564 HLA-DMAP28067 261 aa17.62■□□□□ 0.41
LSM4-202ENST00000593564 SEC22AQ96IW7 307 aa17.62■□□□□ 0.41
LSM4-202ENST00000593564 NXF2Q9GZY0 626 aaKnown RBP17.62■□□□□ 0.41
LSM4-202ENST00000593564 PRCDQ00LT1 54 aa17.61■□□□□ 0.41
LSM4-202ENST00000593564 TBC1D26Q86UD7 250 aa17.61■□□□□ 0.41
LSM4-202ENST00000593564 OR4A16Q8NH70 328 aa17.61■□□□□ 0.41
LSM4-202ENST00000593564 GPX8Q8TED1 209 aa17.61■□□□□ 0.41
LSM4-202ENST00000593564 CSTL1Q9H114 145 aa17.61■□□□□ 0.41
LSM4-202ENST00000593564 TRAV14DV4A0A0A6YYC5 116 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 MPTX1A8MV57 137 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 IGKV1-39P01597 117 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 IGKV1D-39P04432 117 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 TSPAN5P62079 268 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 ZNF124Q15973 351 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 FAM90A2PQ658T7 463 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 H2BFWTQ7Z2G1 175 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 GATAD1Q8WUU5 269 aa17.6■□□□□ 0.41
LSM4-202ENST00000593564 PHLDA1Q8WV24 401 aaPredicted RBP17.6■□□□□ 0.41
LSM4-202ENST00000593564 IGHV3-49A0A0A0MS15 119 aa17.59■□□□□ 0.41
LSM4-202ENST00000593564 MT-CO2P00403 227 aa17.59■□□□□ 0.41
LSM4-202ENST00000593564 TFPI2P48307 235 aa17.59■□□□□ 0.41
LSM4-202ENST00000593564 YIPF6Q96EC8 236 aa17.59■□□□□ 0.41
LSM4-202ENST00000593564 CMTM3Q96MX0 182 aa17.59■□□□□ 0.41
LSM4-202ENST00000593564 UCP3P55916 312 aa17.58■□□□□ 0.4
LSM4-202ENST00000593564 HSPE1P61604 102 aaKnown RBP17.58■□□□□ 0.4
LSM4-202ENST00000593564 LSM3P62310 102 aaKnown RBP17.58■□□□□ 0.4
LSM4-202ENST00000593564 SCPEP1Q9HB40 452 aa17.58■□□□□ 0.4
LSM4-202ENST00000593564 GNG7O60262 68 aa17.57■□□□□ 0.4
LSM4-202ENST00000593564 CD5P06127 495 aa17.57■□□□□ 0.4
LSM4-202ENST00000593564 EIF4EP06730 217 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms