RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 OR51B2Q9Y5P1 312 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 DBX1A6NMT0 343 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 KRASP01116 189 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 F2RP25116 425 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 G6PCP35575 357 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 LPAR6P43657 344 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 CBX5P45973 191 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 DIABLOQ9NR28 239 aa12.03□□□□□ -0.48
LIG1-205ENST00000593425 IGHV3-49A0A0A0MS15 119 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 IGHV7-4-1A0A0J9YVY3 117 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 LOC100506127A0A0U1RQW1 187 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 CHEK1O14757 476 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 PGLYRP1O75594 196 aaPredicted RBP12.02□□□□□ -0.49
LIG1-205ENST00000593425 CTSGP08311 255 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 TFPI2P48307 235 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 RFX2P48378 723 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
LIG1-205ENST00000593425 RHPN1-AS1Q9BWJ2 59 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 IFT46Q9NQC8 304 aa12.02□□□□□ -0.49
LIG1-205ENST00000593425 IGKV3-7A0A075B6H7 116 aa12.01□□□□□ -0.49
LIG1-205ENST00000593425 NANOS2P60321 138 aaKnown RBP12.01□□□□□ -0.49
LIG1-205ENST00000593425 BORCS5Q969J3 196 aa12.01□□□□□ -0.49
LIG1-205ENST00000593425 DGCR14Q96DF8 476 aaKnown RBP12.01□□□□□ -0.49
LIG1-205ENST00000593425 CSTL1Q9H114 145 aa12.01□□□□□ -0.49
LIG1-205ENST00000593425 ANAPC10Q9UM13 185 aa12.01□□□□□ -0.49
LIG1-205ENST00000593425 MPTX1A8MV57 137 aa12□□□□□ -0.49
LIG1-205ENST00000593425 SNAPC5O75971 98 aa12□□□□□ -0.49
LIG1-205ENST00000593425 PMP2P02689 132 aa12□□□□□ -0.49
LIG1-205ENST00000593425 DHRS11Q6UWP2 260 aa12□□□□□ -0.49
LIG1-205ENST00000593425 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
LIG1-205ENST00000593425 OR10C1Q96KK4 312 aa12□□□□□ -0.49
LIG1-205ENST00000593425 TMEM56Q96MV1 263 aa12□□□□□ -0.49
LIG1-205ENST00000593425 RARRES2Q99969 163 aa12□□□□□ -0.49
LIG1-205ENST00000593425 C6orf62Q9GZU0 229 aaPredicted RBP12□□□□□ -0.49
LIG1-205ENST00000593425 IGHV3OR16-13A0A075B7E8 117 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 IGHV3-74A0A0B4J1X5 117 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 C15orf61A6NNL5 157 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 I3L2K1 104 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 NUPL2O15504 423 aaKnown RBP11.99□□□□□ -0.49
LIG1-205ENST00000593425 XRCC3O43542 346 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
LIG1-205ENST00000593425 FAM90A2PQ658T7 463 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 CADM3Q8N126 398 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 SLC25A46Q96AG3 418 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 TMEM14BQ9NUH8 114 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 FBXL17Q9UF56 701 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 PRNDQ9UKY0 176 aa11.99□□□□□ -0.49
LIG1-205ENST00000593425 VPS13DQ5THJ4 4388 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 GPR31O00270 319 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 YIF1AO95070 293 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 IGHV3-48P01763 117 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 TGFBR1P36897 503 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 PRR20EP86478 221 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 PRR20CP86479 221 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 PRR20DP86480 221 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 PRR20BP86481 221 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 PRR20AP86496 221 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 TSPAN14Q8NG11 270 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 OR11H2Q8NH07 326 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 C11orf45Q8TAV5 145 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
LIG1-205ENST00000593425 C11orf68Q9H3H3 251 aaKnown RBP11.98□□□□□ -0.49
LIG1-205ENST00000593425 DEFB4AO15263 64 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 MT-CO2P00403 227 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 NAT1P18440 290 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 MFAP4P55083 255 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 TAS2R20P59543 309 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 RBMS2Q15434 407 aaKnown RBP11.97□□□□□ -0.49
LIG1-205ENST00000593425 PHLDA2Q53GA4 152 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 CMTM1Q8IZ96 169 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 OR5H2Q8NGV7 314 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 NXF2Q9GZY0 626 aaKnown RBP11.97□□□□□ -0.49
LIG1-205ENST00000593425 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
LIG1-205ENST00000593425 TRAV14DV4A0A0A6YYC5 116 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
LIG1-205ENST00000593425 TAS2R46P59540 309 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 NEDD8Q15843 81 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 ZNF114Q8NC26 417 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 S100A16Q96FQ6 103 aaKnown RBP11.96□□□□□ -0.49
LIG1-205ENST00000593425 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 MFFQ9GZY8 342 aa11.96□□□□□ -0.49
LIG1-205ENST00000593425 CA1P00915 261 aaPredicted RBP11.95□□□□□ -0.5
LIG1-205ENST00000593425 IGKV1-39P01597 117 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
LIG1-205ENST00000593425 IGKV1D-39P04432 117 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 HRH1P35367 487 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 UBE2NLQ5JXB2 153 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 TMEM69Q5SWH9 247 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 LILRB2Q8N423 598 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
LIG1-205ENST00000593425 PINX1Q96BK5 328 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms