RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 HBG2P69892 147 aa10.7□□□□□ -0.7
VMP1-217ENST00000593168 ERHP84090 104 aaKnown RBP10.7□□□□□ -0.7
VMP1-217ENST00000593168 TNXAQ16473 311 aa10.7□□□□□ -0.7
VMP1-217ENST00000593168 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
VMP1-217ENST00000593168 HSD17B13Q7Z5P4 300 aaPredicted RBP10.7□□□□□ -0.7
VMP1-217ENST00000593168 OR1S2Q8NGQ3 325 aa10.7□□□□□ -0.7
VMP1-217ENST00000593168 OR5C1Q8NGR4 320 aa10.7□□□□□ -0.7
VMP1-217ENST00000593168 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
VMP1-217ENST00000593168 BSCL2Q96G97 398 aaPredicted RBP10.7□□□□□ -0.7
VMP1-217ENST00000593168 SRSF8Q9BRL6 282 aaKnown RBP10.7□□□□□ -0.7
VMP1-217ENST00000593168 SOX21Q9Y651 276 aaPredicted RBP10.7□□□□□ -0.7
VMP1-217ENST00000593168 DFFBO76075 338 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 CA2P00918 260 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 HTR2BP41595 481 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 RAB11AP62491 216 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 SSBP2P81877 361 aaPredicted RBP10.69□□□□□ -0.7
VMP1-217ENST00000593168 TMEM267Q0VDI3 215 aaPredicted RBP10.69□□□□□ -0.7
VMP1-217ENST00000593168 ZNF266Q14584 549 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 ATP6V1FQ16864 119 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 BSXQ3C1V8 233 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 C10orf55Q5SWW7 151 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 C12orf54Q6X4T0 127 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 HAPLN4Q86UW8 402 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 TMEM217Q8N7C4 229 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 Q8N9W7 124 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 UBAC2Q8NBM4 344 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 SLC24A4Q8NFF2 622 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 OR10P1Q8NGE3 313 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 ST8SIA2Q92186 375 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 RBM14Q96PK6 669 aaKnown RBP10.69□□□□□ -0.7
VMP1-217ENST00000593168 SMIM3Q9BZL3 60 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 WFDC1Q9HC57 220 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 PLXNB1O43157 2135 aa10.69□□□□□ -0.7
VMP1-217ENST00000593168 BORCS7-ASMTA0A0B4J1R7 106 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 A0A1B0GW64 132 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 A6NDX4 124 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 FGF16O43320 207 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 IFNA7P01567 189 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
VMP1-217ENST00000593168 NPY1RP25929 384 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 SNCAP37840 140 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 ARL16Q0P5N6 197 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 C2orf83Q53S99 150 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 RPL7L1Q6DKI1 246 aaKnown RBP10.68□□□□□ -0.7
VMP1-217ENST00000593168 ZNF767PQ75MW2 155 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 BAP18Q8IXM2 172 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
VMP1-217ENST00000593168 ZNF680Q8NEM1 530 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 OR10W1Q8NGF6 305 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 SRSF12Q8WXF0 261 aaKnown RBP10.68□□□□□ -0.7
VMP1-217ENST00000593168 PINX1Q96BK5 328 aaKnown RBP10.68□□□□□ -0.7
VMP1-217ENST00000593168 PITPNC1Q9UKF7 332 aa10.68□□□□□ -0.7
VMP1-217ENST00000593168 PAIP2BQ9ULR5 123 aaKnown RBP10.68□□□□□ -0.7
VMP1-217ENST00000593168 IGLC7A0M8Q6 106 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 CNIH1O95406 144 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 CFDP00746 253 aaPredicted RBP10.67□□□□□ -0.7
VMP1-217ENST00000593168 HLA-DRB1P01911 266 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 OR8U8P0C7N1 319 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 RNASE2P10153 161 aaKnown RBP10.67□□□□□ -0.7
VMP1-217ENST00000593168 SUB1P53999 127 aaKnown RBP eCLIP10.67□□□□□ -0.7
VMP1-217ENST00000593168 GNB1P62873 340 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 CX3CL1P78423 397 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 WT1-ASQ06250 92 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 FXYD3Q14802 87 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 DEFB112Q30KQ8 113 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 ETV3LQ6ZN32 361 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 TMEM170AQ8WVE7 144 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 ATP5SQ99766 215 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 RASL11BQ9BPW5 248 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 SLC25A33Q9BSK2 321 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 GGACTQ9BVM4 153 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 MOB4Q9Y3A3 225 aa10.67□□□□□ -0.7
VMP1-217ENST00000593168 TEX22C9J3V5 150 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 H3BUX3 64 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 OR13C7P0DN81 318 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 SRP14P37108 136 aaKnown RBP10.66□□□□□ -0.7
VMP1-217ENST00000593168 SLC38A11Q08AI6 406 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 CLINT1Q14677 625 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 OR8G2PQ6IF36 304 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 C16orf82Q7Z2V1 217 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 OR5R1Q8NH85 324 aa10.66□□□□□ -0.7
VMP1-217ENST00000593168 PRSS46E5RG02 174 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 M0QZK8 103 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 IFNA4P05014 189 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 EXOSC2Q13868 293 aaKnown RBP10.65□□□□□ -0.7
VMP1-217ENST00000593168 VWC2Q2TAL6 325 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 EIF5AL1Q6IS14 154 aaKnown RBP10.65□□□□□ -0.7
VMP1-217ENST00000593168 Q6YL49 198 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 LILRB2Q8N423 598 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 P2RX4Q99571 388 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 GINS3Q9BRX5 216 aa10.65□□□□□ -0.7
VMP1-217ENST00000593168 TMEM147Q9BVK8 224 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms