RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 OR13C7P0DN81 318 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 PPIFP30405 207 aaKnown RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 S100A10P60903 97 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 RRAS2P62070 204 aaPredicted RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 SLC35B1P78383 322 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 TNFRSF9Q07011 255 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 IL15RAQ13261 267 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 GSG1LQ6UXU4 331 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 CENPVQ7Z7K6 275 aaPredicted RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 OR5AU1Q8NGC0 362 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 OR1L8Q8NGR8 309 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 WIPF2Q8TF74 440 aaPredicted RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 TMEM68Q96MH6 324 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 OR4C12Q96R67 309 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 PLEKHA3Q9HB20 300 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 LSM5Q9Y4Y9 91 aaKnown RBP7.52□□□□□ -1.21
DDX39A-220ENST00000593008 TRAV14DV4A0A0A6YYC5 116 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 PSMB11A5LHX3 300 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 G3V3Q6 166 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 K7EPK0 472 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 IGHV3-48P01763 117 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 RPLP1P05386 114 aaKnown RBP7.51□□□□□ -1.21
DDX39A-220ENST00000593008 PSMB6P28072 239 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 MAS1LP35410 378 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
DDX39A-220ENST00000593008 RAB32Q13637 225 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 OR5B3Q8NH48 314 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 C2orf50Q96LR7 162 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 P2RX4Q99571 388 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 PDCD10Q9BUL8 212 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 C11orf1Q9H5F2 150 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 COA4Q9NYJ1 87 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 OR5AC2Q9NZP5 309 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 ZNF257Q9Y2Q1 563 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 NOTCH1P46531 2555 aa7.51□□□□□ -1.21
DDX39A-220ENST00000593008 WRBO00258 174 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 OR2J3O76001 311 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 IGHV3-11P01762 117 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 IGHV3-23P01764 117 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 FGF2P09038 288 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
DDX39A-220ENST00000593008 PF4V1P10720 104 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 SLC25A6P12236 298 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 CTRB1P17538 263 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 NKX2-1P43699 371 aaPredicted RBP7.5□□□□□ -1.21
DDX39A-220ENST00000593008 PAX9P55771 341 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 SPCS3P61009 180 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 CD83Q01151 205 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 ID3Q02535 119 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 KHDC1LQ5JSQ8 128 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 CTRB2Q6GPI1 263 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 C1QL4Q86Z23 238 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 MRPL41Q8IXM3 137 aaKnown RBP7.5□□□□□ -1.21
DDX39A-220ENST00000593008 OR2C3Q8N628 320 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 COMMD1Q8N668 190 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 DTD1Q8TEA8 209 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 BSCL2Q96G97 398 aaPredicted RBP7.5□□□□□ -1.21
DDX39A-220ENST00000593008 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 OR5B12Q96R08 314 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 SPIN2AQ99865 258 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 SPIN2BQ9BPZ2 258 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 ZNF436Q9C0F3 470 aaPredicted RBP7.5□□□□□ -1.21
DDX39A-220ENST00000593008 FKBP11Q9NYL4 201 aa7.5□□□□□ -1.21
DDX39A-220ENST00000593008 MRPL36Q9P0J6 103 aaKnown RBP7.5□□□□□ -1.21
DDX39A-220ENST00000593008 TCRBV4S1A1TA0A5B7 111 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 MFSD2BA6NFX1 497 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 C15orf62A8K5M9 175 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 CYB5BO43169 146 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 NDUFB8O95169 186 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 MLANAQ16655 118 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 PDLIM3Q53GG5 364 aaPredicted RBP7.49□□□□□ -1.21
DDX39A-220ENST00000593008 HAPLN4Q86UW8 402 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 NDUFA11Q86Y39 141 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 TTC9CQ8N5M4 171 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 OR52E5Q8NH55 327 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 PPP1R1CQ8WVI7 109 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 GNB4Q9HAV0 340 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 RANGRFQ9HD47 186 aaPredicted RBP7.49□□□□□ -1.21
DDX39A-220ENST00000593008 HEYLQ9NQ87 328 aaPredicted RBP7.49□□□□□ -1.21
DDX39A-220ENST00000593008 ZNF355PQ9NSJ1 428 aa7.49□□□□□ -1.21
DDX39A-220ENST00000593008 IGLV11-55A0A075B6I3 123 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 NPIPB5A8MRT5 1133 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 SYNGR2O43760 224 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 TRBV12-3P01733 135 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 IGHG4P01861 327 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 CRYGCP07315 174 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 PSMB8P28062 276 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 TPPP2P59282 170 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 RHOGP84095 191 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 DEFA6Q01524 100 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 KIAA0141Q14154 515 aaPredicted RBP7.48□□□□□ -1.21
DDX39A-220ENST00000593008 DEFB136Q30KP8 78 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 BSXQ3C1V8 233 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 AKIRIN2Q53H80 203 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 SLC24A4Q8NFF2 622 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms