RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 SCRT1Q9BWW7 348 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 WASHC3Q9Y3C0 194 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 ARID1AO14497 2285 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SAA2-SAA4A0A096LPE2 208 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 TRAV34A0A0B4J273 112 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 E9PLN8 166 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 M0R1B8 84 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SPINK4O60575 86 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 LYZL6O75951 148 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 TMEM50AO95807 157 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 PPBPP02775 128 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SNRPCP09234 159 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 C1QTNF9P0C862 333 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 DUTP33316 252 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 CASP6P55212 293 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 RPL8P62917 257 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 RBPJQ06330 500 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 EFNB3Q15768 340 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 RSPO1Q2MKA7 263 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 TREML4Q6UXN2 200 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 CXorf67Q86X51 503 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 C5orf17Q8NAS9 161 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ATP6V0BQ99437 205 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 TMEM208Q9BTX3 173 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 IFI27L2Q9H2X8 130 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 MSL2Q9HCI7 577 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 AURKAIP1Q9NWT8 199 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 SEC16AO15027 2179 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SPAG17Q6Q759 2223 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 CCDC168Q8NDH2 2452 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 EPOPA6NHQ4 379 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 PRR33A8MZF0 331 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 PEX7O00628 323 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 CA2P00918 260 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 GPX1P07203 203 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ACP1P24666 158 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 LGALS7P47929 136 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SRSF2Q01130 221 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 ZNF726P1Q15940 193 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ZNF585BQ52M93 769 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 C1orf185Q5T7R7 199 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 OR4A47Q6IF82 309 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 OR10AG1Q8NH19 301 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 H1FXQ92522 213 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 TMEM186Q96B77 213 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SCNM1Q9BWG6 230 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SNHG12Q9BXW3 62 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 LPAR2Q9HBW0 351 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 THYN1Q9P016 225 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 KIAA0100Q14667 2235 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 IGKV1-6A0A0C4DH72 117 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 IGHV1-69-2A0A0G2JMI3 117 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 C5orf63A6NC05 138 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 NTN3O00634 580 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 SS18L1O75177 396 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 RHBDL1O75783 438 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 KLF7O75840 302 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 CRYGCP07315 174 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ESDP10768 282 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 HINT1P49773 126 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 PPOXP50336 477 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 TMPRSS3P57727 454 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 PRCDQ00LT1 54 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 MEF2CQ06413 473 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 ZFP36L1Q07352 338 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 C2orf83Q53S99 150 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 BMPERQ8N8U9 685 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 OR4C13Q8NGP0 309 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 PGPEP1Q9NXJ5 209 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 HIGD1AQ9Y241 93 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 UNC13CQ8NB66 2214 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ZNF469Q96JG9 3925 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 COL5A1P20908 1838 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 A0A0G2JRQ6 117 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 SERTM2A0A1B0GWG4 89 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 FAM231BA6NCW3 169 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 GAGE10A6NGK3 116 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 J3QL48 77 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 K7ESF4 209 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 CNIH1O95406 144 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 RFPL3SP0C7P2 107 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ARL3P36405 182 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 RPL15P61313 204 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 SEC11AP67812 179 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ZXDAP98168 799 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ARL16Q0P5N6 197 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 MORN2Q502X0 79 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 TMEM108Q6UXF1 575 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 Q6ZRM9 215 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ERASQ7Z444 233 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 DOLPP1Q86YN1 238 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ZNF295-AS1Q8N0V1 137 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ABHD12Q8N2K0 398 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 MTURNQ8N3F0 131 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 TSKUQ8WUA8 353 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ALKBH7Q9BT30 221 aaPredicted RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 RPP21Q9H633 154 aaKnown RBP2.95□□□□□ -1.94
VMP1-216ENST00000592790 PLA2G3Q9NZ20 509 aa2.95□□□□□ -1.94
VMP1-216ENST00000592790 ABCA2Q9BZC7 2435 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms