RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CHRNA7P36544 502 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 GVINP1Q7Z2Y8 2422 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 HIST3H2BBQ8N257 126 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 PCGF1Q9BSM1 259 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 BSNQ9UPA5 3926 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 IGHV1-69-2A0A0G2JMI3 117 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 A0A1W2PN81 502 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 B9A039 149 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 DLL1O00548 723 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 DLX6P56179 175 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 FAM3BP58499 235 aaPredicted RBP13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 TMEM155Q4W5P6 130 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 FAM78BQ5VT40 261 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 OR10W1Q8NGF6 305 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 FUT9Q9Y231 359 aa13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 ANKRD11Q6UB99 2663 aaPredicted RBP13.46□□□□□ -0.26
PRKCSH-217ENST00000592741 FOXH1O75593 365 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 FABP1P07148 127 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 SOD3P08294 240 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 CD69Q07108 199 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 GAMTQ14353 236 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 MIR17HGQ75NE6 70 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 MOB3BQ86TA1 216 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 OR9G1Q8NH87 305 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 UHRF2Q96PU4 802 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 WASHC3Q9Y3C0 194 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 A0A087X0M5 115 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 MDFIC2A0A1B0GVS7 189 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 A0A1B0GX30 115 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 INS-IGF2F8WCM5 200 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 ACTL6BO94805 426 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 IL3RAP26951 378 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 OR10J1P30954 320 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 CASP6P55212 293 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 CLEC12BQ2HXU8 276 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 GFI1BQ5VTD9 330 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 AURKAIP1Q9NWT8 199 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 PITPNC1Q9UKF7 332 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 ARL2-SNX15V9GYD0 113 aa13.45□□□□□ -0.26
PRKCSH-217ENST00000592741 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 ZNF137PP52743 207 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 DIAPH2-AS1Q14236 149 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 TGIF2LXQ8IUE1 241 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 CACNG8Q8WXS5 425 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 ST6GALNAC6Q969X2 333 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 IMMP2LQ96T52 175 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 GPR61Q9BZJ8 451 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 CHODLQ9H9P2 273 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 GSN-AS1Q9NRJ2 163 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 TMEM167BQ9NRX6 74 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 TECRQ9NZ01 308 aaKnown RBP13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 ACACAQ13085 2346 aa13.44□□□□□ -0.26
PRKCSH-217ENST00000592741 IGKV1OR2-108A0A075B7D4 117 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 TYMSP04818 313 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 C1QTNF9P0C862 333 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 IGHV1-8P0DP01 117 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 GPX4P36969 197 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 PDZD11Q5EBL8 140 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 ZNF114Q8NC26 417 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 SFRP2Q96HF1 295 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 BTF3L4Q96K17 158 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 C19orf24Q9BVV8 132 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 TRBV23-1A0A0A0MS06 115 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 AREGP15514 252 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 LCN2P80188 198 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 VMA21Q3ZAQ7 101 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 PNKDQ8N490 385 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 OR10D4PQ8NGN7 298 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 C11orf52Q96A22 123 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 MIOXQ9UGB7 285 aa13.43□□□□□ -0.26
PRKCSH-217ENST00000592741 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 MC5RP33032 325 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 PSG5Q15238 335 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 HLA-DRB5Q30154 266 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 APC2O95996 2303 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 OR5G3P0C626 314 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 TAS2R45P59539 299 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 MLANAQ16655 118 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 TMEM133Q9H2Q1 129 aa13.42□□□□□ -0.26
PRKCSH-217ENST00000592741 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
PRKCSH-217ENST00000592741 ACTL10Q5JWF8 245 aa13.41□□□□□ -0.26
PRKCSH-217ENST00000592741 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
PRKCSH-217ENST00000592741 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-217ENST00000592741 ZNF430Q9H8G1 570 aaPredicted RBP13.41□□□□□ -0.26
PRKCSH-217ENST00000592741 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 E7EUB6 86 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 PLAUP00749 431 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 PYY3Q5JQD4 70 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 TMEM183AQ8IXX5 376 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 LINC01560Q8TB33 94 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 MSRB2Q9Y3D2 182 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 C9JCJ5 164 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms