RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	VCX3A	Q9NNX9	186 aa		13.37	□□□□□ -0.27
CIRBP-238	ENST00000592412	TXNL4B	Q9NX01	149 aa	Known RBP	13.37	□□□□□ -0.27
CIRBP-238	ENST00000592412	RHBDL2	Q9NX52	303 aa		13.37	□□□□□ -0.27
CIRBP-238	ENST00000592412	SSR3	Q9UNL2	185 aa		13.37	□□□□□ -0.27
CIRBP-238	ENST00000592412	IGHV7-4-1	A0A0J9YVY3	117 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	CHEK1	O14757	476 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	DEFB4A	O15263	64 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	FCER2	P06734	321 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	FGF9	P31371	208 aa	Predicted RBP	13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	CATR1	Q13166	79 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	UBAC2	Q8NBM4	344 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	RHPN1-AS1	Q9BWJ2	59 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	COMMD9	Q9P000	198 aa		13.36	□□□□□ -0.27
CIRBP-238	ENST00000592412	IGHV3-49	A0A0A0MS15	119 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	TFPI2	P48307	235 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	FAM90A2P	Q658T7	463 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	SFXN4	Q6P4A7	337 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	TMEM17	Q86X19	198 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	OR1L8	Q8NGR8	309 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	OR5H6	Q8NGV6	325 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	LSM10	Q969L4	123 aa	Known RBP	13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	OR10C1	Q96KK4	312 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	MFF	Q9GZY8	342 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	APLN	Q9ULZ1	77 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	NSG2	Q9Y328	171 aa		13.35	□□□□□ -0.27
CIRBP-238	ENST00000592412	MARCH11	A6NNE9	402 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	CYB5B	O43169	146 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	GNRHR	P30968	328 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412		Q56UQ5	140 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	AADACL3	Q5VUY0	350 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	C2CD4C	Q8TF44	421 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	GIMAP1	Q8WWP7	306 aa		13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.34	□□□□□ -0.27
CIRBP-238	ENST00000592412	IGKV3-7	A0A075B6H7	116 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	TRAV18	A0A075B6X5	111 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	LOC100506127	A0A0U1RQW1	187 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	DBX1	A6NMT0	343 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	IFNA4	P05014	189 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	TMEM116	Q8NCL8	245 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	HINT2	Q9BX68	163 aa		13.33	□□□□□ -0.28
CIRBP-238	ENST00000592412	IGHV3OR16-13	A0A075B7E8	117 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	IGHV3-74	A0A0B4J1X5	117 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	CA1	P00915	261 aa	Predicted RBP	13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	CLEC2L	P0C7M8	214 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	TPRA1	Q86W33	373 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	GBGT1	Q8N5D6	347 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	FCAMR	Q8WWV6	532 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	OR51B2	Q9Y5P1	312 aa		13.32	□□□□□ -0.28
CIRBP-238	ENST00000592412	RLN1	P04808	185 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412	F2R	P25116	425 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412	TCTA	P57738	103 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412	LILRB2	Q8N423	598 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412		Q8NAQ8	132 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412	OR5AP2	Q8NGF4	316 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412	AUNIP	Q9H7T9	357 aa		13.31	□□□□□ -0.28
CIRBP-238	ENST00000592412		I3L2K1	104 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	NUPL2	O15504	423 aa	Known RBP	13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	PGLYRP1	O75594	196 aa	Predicted RBP	13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	KRAS	P01116	189 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	SDC2	P34741	201 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	G6PC	P35575	357 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	LPAR6	P43657	344 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	ERVK-16	P61578	105 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	CADM3	Q8N126	398 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	FAM24B	Q8N5W8	94 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	OR1P1	Q8NH06	330 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412	RNF167	Q9H6Y7	350 aa		13.3	□□□□□ -0.28
CIRBP-238	ENST00000592412		A0A1B0GVY2	172 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	MEIS3P1	A6NDR6	274 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	IGLL5	B9A064	214 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	YIF1A	O95070	293 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	APOH	P02749	345 aa	Predicted RBP	13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	GIG44	P09565	113 aa	Predicted RBP	13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	CMC4	P56277	68 aa	Predicted RBP	13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	REL	Q04864	619 aa	Predicted RBP	13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	MXD1	Q05195	221 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	ST8SIA2	Q92186	375 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	DGCR14	Q96DF8	476 aa	Known RBP	13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	YIPF6	Q96EC8	236 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	NXF2	Q9GZY0	626 aa	Known RBP	13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	TMEM14B	Q9NUH8	114 aa		13.29	□□□□□ -0.28
CIRBP-238	ENST00000592412	TRAV14DV4	A0A0A6YYC5	116 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	C15orf61	A6NNL5	157 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	IGHV3-48	P01763	117 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	RBMY1A1	P0DJD3	496 aa	Known RBP	13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	RBMY1C	P0DJD4	496 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	SCAND1	P57086	179 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	TMEM187	Q14656	261 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	RBMY1F	Q15415	496 aa	Known RBP	13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	LEMD1	Q68G75	181 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	TCF24	Q7RTU0	167 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412	SLC25A46	Q96AG3	418 aa		13.28	□□□□□ -0.28
CIRBP-238	ENST00000592412		A0A0A6YYH2	397 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412		A6NJ64	397 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	RFX2	P48378	723 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	DEFB131A	P59861	70 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	HERV-K104	P61576	105 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	DHRS11	Q6UWP2	260 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	MOB3A	Q96BX8	217 aa		13.27	□□□□□ -0.29

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