RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 PLAURQ03405 335 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 IGSF11Q5DX21 431 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 DHRS11Q6UWP2 260 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 RAB24Q969Q5 203 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 GPR132Q9UNW8 380 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 ANAPC1Q9H1A4 1944 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 KRBOX1C9JBD0 128 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 UBE2CO00762 179 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 ASIPP42127 132 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 CRYBA2P53672 197 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 DMRTC1Q5HYR2 192 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 OR11H6Q8NGC7 330 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 NEU1Q99519 415 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 OR51M1Q9H341 326 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 RBKSQ9H477 322 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 MBNL3Q9NUK0 354 aaKnown RBP5.16□□□□□ -1.58
SMAD4-212ENST00000591126 AP5S1Q9NUS5 200 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 A0A1B0GV50 99 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 PCNX2A6NKB5 2137 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 A8MWL6 223 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 SAA1P0DJI8 122 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-212ENST00000591126 MST1LQ2TV78 715 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 C1orf194Q5T5A4 169 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 Q6AWC8 147 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 TCF24Q7RTU0 167 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 FAM89BQ8N5H3 189 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 CITED4Q96RK1 184 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 WDR81Q562E7 1941 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 PLXNA2O75051 1894 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 IGHV4-30-2A0A087WSY4 118 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 TRAV8-6A0A0B4J262 113 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 A0A1B0GW15 77 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 C1orf196B1AJZ1 125 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 I3L521 148 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 UCP1P25874 307 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 SULT1A2P50226 295 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 NEUROG1Q92886 237 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 PCM1Q15154 2024 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 IGKV1D-43A0A0B4J1Z2 117 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 TRAV39A0A0B4J263 110 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 PPP5D1E7EU14 171 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 K7EM74 188 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 CX3CL1P78423 397 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 SELENOHQ8IZQ5 122 aaKnown RBP5.15□□□□□ -1.58
SMAD4-212ENST00000591126 C10orf111Q8N326 155 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 ORAI1Q96D31 301 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 SAT2Q96F10 170 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-212ENST00000591126 PUS1Q9Y606 427 aaKnown RBP eCLIP5.15□□□□□ -1.58
SMAD4-212ENST00000591126 TRAV21A0A0B4J279 112 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 FNDC10F2Z333 226 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 H3BP45 60 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 AMTP48728 403 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM144Q7Z5S9 345 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 LRTM2Q8N967 370 aa5.15□□□□□ -1.58
SMAD4-212ENST00000591126 A0A1W2PNU3 283 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 CBY3A6NI87 242 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 HMSDA8MTL9 139 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 NDUFA4O00483 81 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 TNFRSF13BO14836 293 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 ZNHIT1O43257 154 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 IGHV3-11P01762 117 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 CD74P04233 296 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 CXCL2P19875 107 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF415Q09FC8 603 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 RPL39P5Q59GN2 51 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 PRR31Q5SQ13 230 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 FAM219BQ5XKK7 198 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 FAM90A2PQ658T7 463 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 ASCL4Q6XD76 172 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 SIGLEC15Q6ZMC9 328 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 ZCCHC24Q8N2G6 241 aaKnown RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 RPRMLQ8N4K4 120 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 LINC00477Q96M19 166 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 ALKBH7Q9BT30 221 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 RPS10P5Q9NQ39 176 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 MRPS16Q9Y3D3 137 aaKnown RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 IGHV4-61A0A0C4DH41 118 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 MEX3AA1L020 520 aaKnown RBP5.15□□□□□ -1.59
SMAD4-212ENST00000591126 C10orf142B7Z368 130 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 P2RY4P51582 365 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 FCN2Q15485 313 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 TMEM91Q6ZNR0 172 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 GVQW1Q8N7I0 195 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 NPIPB3Q92617 1050 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 SEC11CQ9BY50 192 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 RTN4RQ9BZR6 473 aa5.15□□□□□ -1.59
SMAD4-212ENST00000591126 FAM24AA6NFZ4 105 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF737O75373 536 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 MPC2O95563 127 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 C1QBP02746 253 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 DUTP33316 252 aaKnown RBP5.14□□□□□ -1.59
SMAD4-212ENST00000591126 DEFB112Q30KQ8 113 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 C2orf83Q53S99 150 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 CD177Q8N6Q3 437 aa5.14□□□□□ -1.59
SMAD4-212ENST00000591126 RSG1Q9BU20 258 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms