RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 TSPAN5P62079 268 aa13.35□□□□□ -0.27
PRKCSH-211ENST00000590098 PHLDA2Q53GA4 152 aa13.35□□□□□ -0.27
PRKCSH-211ENST00000590098 LPCAT3Q6P1A2 487 aa13.35□□□□□ -0.27
PRKCSH-211ENST00000590098 CHRDL1Q9BU40 450 aa13.35□□□□□ -0.27
PRKCSH-211ENST00000590098 TP53TG1Q9Y2A0 90 aa13.35□□□□□ -0.27
PRKCSH-211ENST00000590098 SMIM31A0A1B0GVY4 71 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 CXorf65A6NEN9 183 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 K7EMT4 169 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 UBE2CO00762 179 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 SPRY2O43597 315 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 BMI1P35226 326 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 Q6ZWC4 215 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 LYSMD2Q8IV50 215 aa13.34□□□□□ -0.27
PRKCSH-211ENST00000590098 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 C15orf62A8K5M9 175 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 K7EIM0 57 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 ZNF207O43670 478 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 WFDC3Q8IUB2 231 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 STPG3Q8N7X2 389 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 OR1P1Q8NH06 330 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 YIPF6Q96EC8 236 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 TMEM14BQ9NUH8 114 aa13.33□□□□□ -0.28
PRKCSH-211ENST00000590098 A0A0J9YWU9 116 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 F8W735 103 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 NUPL2O15504 423 aaKnown RBP13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 ADMP35318 185 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 DEFB135Q30KP9 77 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 OR4A16Q8NH70 328 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 SLC25A46Q96AG3 418 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 MISP3Q96FF7 219 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 COMMD3Q9UBI1 195 aa13.32□□□□□ -0.28
PRKCSH-211ENST00000590098 A0A087WXM4 84 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 DBX1A6NMT0 343 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 YIF1AO95070 293 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 EIF4EP06730 217 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 CTSDP07339 412 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 CTSGP08311 255 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 MFAP4P55083 255 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 H2BFWTQ7Z2G1 175 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 TBC1D26Q86UD7 250 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 KIR2DL5BQ8NHK3 375 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 GPX8Q8TED1 209 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 C6orf62Q9GZU0 229 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 SCPEP1Q9HB40 452 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 SMPXQ9UHP9 88 aa13.31□□□□□ -0.28
PRKCSH-211ENST00000590098 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
PRKCSH-211ENST00000590098 APOA1P02647 267 aa13.3□□□□□ -0.28
PRKCSH-211ENST00000590098 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
PRKCSH-211ENST00000590098 SNX29P2Q8IUI4 249 aa13.3□□□□□ -0.28
PRKCSH-211ENST00000590098 GALNT14Q96FL9 552 aa13.3□□□□□ -0.28
PRKCSH-211ENST00000590098 TXN2Q99757 166 aa13.3□□□□□ -0.28
PRKCSH-211ENST00000590098 RCVRNP35243 200 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 CMC4P56277 68 aaPredicted RBP13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 RNF183Q96D59 192 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 SEC22AQ96IW7 307 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 RHPN1-AS1Q9BWJ2 59 aa13.29□□□□□ -0.28
PRKCSH-211ENST00000590098 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 I3L2K1 104 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 CHEK1O14757 476 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 LY6G6CO95867 125 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 UCP3P55916 312 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 ERHP84090 104 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 PRCDQ00LT1 54 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 TMEM217Q8N7C4 229 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 RNF2Q99496 336 aa13.28□□□□□ -0.28
PRKCSH-211ENST00000590098 IGHV3-49A0A0A0MS15 119 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 TRAV14DV4A0A0A6YYC5 116 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 GNG7O60262 68 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 MT-CO2P00403 227 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 FCGR2BP31994 310 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 TFPI2P48307 235 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 EWSR1Q01844 656 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 CEMP1Q6PRD7 247 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 ZNF114Q8NC26 417 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 MRGPRFQ96AM1 343 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 PINX1Q96BK5 328 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 OR10C1Q96KK4 312 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 NXF2Q9GZY0 626 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
PRKCSH-211ENST00000590098 IGKV3-7A0A075B6H7 116 aa13.26□□□□□ -0.29
PRKCSH-211ENST00000590098 IGKV1-39P01597 117 aa13.26□□□□□ -0.29
PRKCSH-211ENST00000590098 IGHV3-48P01763 117 aa13.26□□□□□ -0.29
PRKCSH-211ENST00000590098 IGKV1D-39P04432 117 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms