RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CYP2G1PQ6ZSU1 146 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 OR4C13Q8NGP0 309 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 OR1L8Q8NGR8 309 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 LINC01560Q8TB33 94 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 TMEM167AQ8TBQ9 72 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 FLYWCH2Q96CP2 140 aaKnown RBP8.09□□□□□ -1.11
VPS25-202ENST00000589219 MGST2Q99735 147 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 TXNDC17Q9BRA2 123 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 NAT8Q9UHE5 227 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
VPS25-202ENST00000589219 DSCAML1Q8TD84 2053 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 A0A1W2PPV4 95 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 IGKV1-16P04430 117 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 RAB5AP20339 215 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 MC5RP33032 325 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 RPL8P62917 257 aaKnown RBP8.08□□□□□ -1.12
VPS25-202ENST00000589219 DEFB113Q30KQ7 82 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 BSXQ3C1V8 233 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 TEPPQ6URK8 271 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 TGIF2LXQ8IUE1 241 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 MRPL41Q8IXM3 137 aaKnown RBP8.08□□□□□ -1.12
VPS25-202ENST00000589219 ABHD12Q8N2K0 398 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 C8orf46Q8TAG6 207 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 ST6GALNAC6Q969X2 333 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 YPEL4Q96NS1 127 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 TMEM133Q9H2Q1 129 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 TMEM242Q9NWH2 141 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 AMMECR1Q9Y4X0 333 aaPredicted RBP8.08□□□□□ -1.12
VPS25-202ENST00000589219 DSCAMO60469 2012 aa8.08□□□□□ -1.12
VPS25-202ENST00000589219 TEX50A0A1B0GTY4 177 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 F6UZH7 168 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 SIAH2O43255 324 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 TGOLN2O43493 480 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 PDE6DO43924 150 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 TSPAN9O75954 239 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 YIF1AO95070 293 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 PLAUP00749 431 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 FBP1P09467 338 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 RPL29P47914 159 aaKnown RBP8.07□□□□□ -1.12
VPS25-202ENST00000589219 CD81P60033 236 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 B2MP61769 119 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 HNF4GQ14541 408 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 SMUG1Q53HV7 270 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 ARSJQ5FYB0 599 aaPredicted RBP8.07□□□□□ -1.12
VPS25-202ENST00000589219 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 OR8B3Q8NGG8 313 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 NANPQ8TBE9 248 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 NEU4Q8WWR8 484 aaPredicted RBP8.07□□□□□ -1.12
VPS25-202ENST00000589219 SLC35E1Q96K37 410 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 OR8B2Q96RD0 313 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 SMIM7Q9BQ49 75 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 HINT2Q9BX68 163 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 COMMD5Q9GZQ3 224 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 RAB1BQ9H0U4 201 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 SDF2L1Q9HCN8 221 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 ZNRD1Q9P1U0 126 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 MIOXQ9UGB7 285 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 ARL2-SNX15V9GYD0 113 aa8.07□□□□□ -1.12
VPS25-202ENST00000589219 CADP27708 2225 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 hCG_1809904A0A1W2PP81 198 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 A0A1W2PR64 198 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 A0A1W2PRV1 198 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 SRRM4A7MD48 611 aaKnown RBP8.06□□□□□ -1.12
VPS25-202ENST00000589219 CXorf1O96002 111 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 MT-CO2P00403 227 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 STAG3L2P0CL84 134 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 STAG3L3P0CL85 134 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 RNASE2P10153 161 aaKnown RBP8.06□□□□□ -1.12
VPS25-202ENST00000589219 LGALS7P47929 136 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 PRRX1P54821 245 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 RHOBP62745 196 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 ERHP84090 104 aaKnown RBP8.06□□□□□ -1.12
VPS25-202ENST00000589219 HABP2Q14520 560 aaPredicted RBP8.06□□□□□ -1.12
VPS25-202ENST00000589219 WDR25Q64LD2 544 aaPredicted RBP8.06□□□□□ -1.12
VPS25-202ENST00000589219 TMEM144Q7Z5S9 345 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 IQCF2Q8IXL9 164 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 FAM24BQ8N5W8 94 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 STPG3Q8N7X2 389 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 BEND2Q8NDZ0 799 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 ISOC2Q96AB3 205 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 TIMD4Q96H15 378 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 NDUFA4L2Q9NRX3 87 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 CBLN4Q9NTU7 201 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
VPS25-202ENST00000589219 USF3Q68DE3 2245 aa8.06□□□□□ -1.12
VPS25-202ENST00000589219 PLCE1Q9P212 2302 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 IGHV2-26A0A0B4J1V2 119 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 CLDN34H7C241 214 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 VENTXO95231 258 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 GPX4P36969 197 aaPredicted RBP8.05□□□□□ -1.12
VPS25-202ENST00000589219 RND2P52198 227 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 SUB1P53999 127 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS25-202ENST00000589219 ERVFRD-1P60508 538 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 PRR20EP86478 221 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 PRR20CP86479 221 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 PRR20DP86480 221 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 PRR20BP86481 221 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms