RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 GINS3Q9BRX5 216 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 OR13C7P0DN81 318 aa20.66■□□□□ 0.9
SCAMP4-210ENST00000588555 RAB11AP62491 216 aa20.66■□□□□ 0.9
SCAMP4-210ENST00000588555 ZNF562Q6V9R5 426 aa20.66■□□□□ 0.9
SCAMP4-210ENST00000588555 RBM14Q96PK6 669 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-210ENST00000588555 MDFIC2A0A1B0GVS7 189 aa20.65■□□□□ 0.9
SCAMP4-210ENST00000588555 SNCAP37840 140 aa20.65■□□□□ 0.9
SCAMP4-210ENST00000588555 DEFB112Q30KQ8 113 aa20.65■□□□□ 0.9
SCAMP4-210ENST00000588555 H3BUX3 64 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 CNIH1O95406 144 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 HLA-DRB1P01911 266 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 AREGP15514 252 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 CX3CL1P78423 397 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 FXYD3Q14802 87 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 ATP6V1FQ16864 119 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 VWC2Q2TAL6 325 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 TMEM219Q86XT9 240 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 C22orf15Q8WYQ4 148 aa20.64■□□□□ 0.9
SCAMP4-210ENST00000588555 IFNA4P05014 189 aa20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 NDPQ00604 133 aa20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 TUSC1Q2TAM9 212 aa20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 TMED6Q8WW62 240 aa20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 P2RX4Q99571 388 aa20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 SRSF8Q9BRL6 282 aaKnown RBP20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 SLC25A33Q9BSK2 321 aa20.64■□□□□ 0.89
SCAMP4-210ENST00000588555 C5orf56Q8N8D9 126 aa20.63■□□□□ 0.89
SCAMP4-210ENST00000588555 HSD17B11Q8NBQ5 300 aa20.63■□□□□ 0.89
SCAMP4-210ENST00000588555 ZNF114Q8NC26 417 aa20.63■□□□□ 0.89
SCAMP4-210ENST00000588555 TMEM147Q9BVK8 224 aa20.63■□□□□ 0.89
SCAMP4-210ENST00000588555 FLNBO75369 2602 aaKnown RBP20.63■□□□□ 0.89
SCAMP4-210ENST00000588555 A6NDX4 124 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 REG1AP05451 166 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 APELAP0DMC3 54 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 FAM74A1Q5RGS3 127 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 HSD17B13Q7Z5P4 300 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 MRPL41Q8IXM3 137 aaKnown RBP20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 SSMEM1Q8WWF3 244 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 RASL11BQ9BPW5 248 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 MOB4Q9Y3A3 225 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 IGHV7-81A0A0B4J1V7 117 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 CD5LO43866 347 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 PARD6GQ9BYG4 376 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 UQCC1Q9NVA1 299 aa20.62■□□□□ 0.89
SCAMP4-210ENST00000588555 RPS10-NUDT3A0A1W2PQS6 291 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 FGF16O43320 207 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 FBXO24O75426 580 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 IFNA5P01569 189 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 SPP1P10451 314 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 PVRIGQ6DKI7 326 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 ARPC1AQ92747 370 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 FAM103A1Q9BTL3 118 aaKnown RBP20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 GGACTQ9BVM4 153 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 SH3BGRL3Q9H299 93 aa20.61■□□□□ 0.89
SCAMP4-210ENST00000588555 UBE2L5PA0A1B0GUS4 154 aa20.6■□□□□ 0.89
SCAMP4-210ENST00000588555 AMY1AP04745 511 aa20.6■□□□□ 0.89
SCAMP4-210ENST00000588555 ATP6V0CP27449 155 aa20.6■□□□□ 0.89
SCAMP4-210ENST00000588555 DLK1P80370 383 aa20.6■□□□□ 0.89
SCAMP4-210ENST00000588555 HSPB9Q9BQS6 159 aa20.6■□□□□ 0.89
SCAMP4-210ENST00000588555 SEC11BP0C7V7 166 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 MDKP21741 143 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 RUNX1Q01196 453 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 LY6EQ16553 131 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 WDR61Q9GZS3 305 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 PLA2G2EQ9NZK7 142 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 FBXO7Q9Y3I1 522 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 SUB1P53999 127 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 EIF5AL1Q6IS14 154 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 C19orf35Q6ZS72 473 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 SLC25A32Q9H2D1 315 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 RFNGQ9Y644 331 aa20.59■□□□□ 0.89
SCAMP4-210ENST00000588555 EGR2P11161 476 aaPredicted RBP20.58■□□□□ 0.89
SCAMP4-210ENST00000588555 MFAP2P55001 183 aa20.58■□□□□ 0.89
SCAMP4-210ENST00000588555 ARSJQ5FYB0 599 aaPredicted RBP20.58■□□□□ 0.89
SCAMP4-210ENST00000588555 ASPHD1Q5U4P2 390 aa20.58■□□□□ 0.89
SCAMP4-210ENST00000588555 PCNPQ8WW12 178 aaKnown RBP20.58■□□□□ 0.89
SCAMP4-210ENST00000588555 ZNF48Q96MX3 618 aaPredicted RBP20.58■□□□□ 0.89
SCAMP4-210ENST00000588555 IGHV4-59P01825 116 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 IER3P46695 156 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 SLC25A24Q6NUK1 477 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 OR1P1Q8NH06 330 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 ABHD5Q8WTS1 349 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 TAF15Q92804 592 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 PRDM13Q9H4Q3 707 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 PITPNC1Q9UKF7 332 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 F11RQ9Y624 299 aaKnown RBP20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 SONP18583 2426 aaKnown RBP20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 FAM157CP0CG43 387 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 CTRB1P17538 263 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 CLLU1Q5K131 121 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 CTRB2Q6GPI1 263 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 TEX29Q8N6K0 151 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 RNASEH2CQ8TDP1 164 aaKnown RBP20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 GNPNAT1Q96EK6 184 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 DMRT1Q9Y5R6 373 aa20.57■□□□□ 0.88
SCAMP4-210ENST00000588555 NMBP08949 121 aa20.56■□□□□ 0.88
SCAMP4-210ENST00000588555 SCGB1C1Q8TD33 95 aa20.56■□□□□ 0.88
SCAMP4-210ENST00000588555 WDR83OSQ9Y284 106 aa20.56■□□□□ 0.88
SCAMP4-210ENST00000588555 SH2D7A6NKC9 451 aaPredicted RBP20.55■□□□□ 0.88
SCAMP4-210ENST00000588555 FNDC10F2Z333 226 aa20.55■□□□□ 0.88
SCAMP4-210ENST00000588555 CD69Q07108 199 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms