RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 GNB1P62873 340 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 JOSD1Q15040 202 aaPredicted RBP11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 SLC25A48Q6ZT89 311 aaKnown RBP11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 TMEM144Q7Z5S9 345 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 LRP11Q86VZ4 500 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 OR10G8Q8NGN5 311 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 VSTM2AQ8TAG5 236 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 C11orf52Q96A22 123 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 SFRP2Q96HF1 295 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 HIST1H2BLQ99880 126 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 GCM1Q9NP62 436 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 TECRQ9NZ01 308 aaKnown RBP11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 NAV3Q8IVL0 2385 aa11.54□□□□□ -0.56
NEDD4L-223ENST00000588516 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 TRAV20A0A0B4J274 112 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 J3QR06 171 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 IGHV1-46P01743 117 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 TFF1P04155 84 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 CD40P25942 277 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 GPX4P36969 197 aaPredicted RBP11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 ZNF134P52741 427 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 C2orf83Q53S99 150 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 MIC13Q5XKP0 118 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 FAM53AQ6NSI3 398 aaPredicted RBP11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 PQLC2Q6ZP29 291 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 ABHD12Q8N2K0 398 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 C8orf31Q8N9H6 132 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 NECAP1Q8NC96 275 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 OR1L8Q8NGR8 309 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 GATAD1Q8WUU5 269 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
NEDD4L-223ENST00000588516 HCFC1P51610 2035 aa11.52□□□□□ -0.56
NEDD4L-223ENST00000588516 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 A0A1W2PN81 502 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 ZNF320A2RRD8 509 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 INS-IGF2F8WCM5 200 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 CA2P00918 260 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 CHRNA7P36544 502 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 UBE2G2P60604 165 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 RPS16P62249 146 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 ERHP84090 104 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 LBHQ53QV2 105 aaPredicted RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 VHLLQ6RSH7 139 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 STPG3Q8N7X2 389 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 NOL4LQ96MY1 436 aaPredicted RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 PATZ1Q9HBE1 687 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 TRAPPC1Q9Y5R8 145 aa11.52□□□□□ -0.57
NEDD4L-223ENST00000588516 SVILO95425 2214 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 PRRG2O14669 202 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 PRR20EP86478 221 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 PRR20CP86479 221 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 PRR20DP86480 221 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 PRR20BP86481 221 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 PRR20AP86496 221 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 EFNB3Q15768 340 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 NGBQ9NPG2 151 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 FUT9Q9Y231 359 aa11.51□□□□□ -0.57
NEDD4L-223ENST00000588516 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 GTF3C1Q12789 2109 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 C16orf97H3BN30 126 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 NPPCP23582 126 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 ATP5G3P48201 142 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 FAM209BQ5JX69 171 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 ALKBH2Q6NS38 261 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 ZNF833PQ6ZTB9 187 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 IL36BQ9NZH7 164 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 MTORP42345 2549 aa11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 INTS1Q8N201 2190 aaKnown RBP11.5□□□□□ -0.57
NEDD4L-223ENST00000588516 DOCK11Q5JSL3 2073 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 TANC2Q9HCD6 1990 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 DIDO1Q9BTC0 2240 aaKnown RBP11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 TRAV3A0A0B4J244 114 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 SLC31A2O15432 143 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 IL3RAP26951 378 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 LINC00205P59089 165 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 IQCJQ1A5X6 159 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 PDZD11Q5EBL8 140 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 GFI1BQ5VTD9 330 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 LINC00311Q8N616 119 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 SGMS2Q8NHU3 365 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 TMEM37Q8WXS4 190 aa11.49□□□□□ -0.57
NEDD4L-223ENST00000588516 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms