RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 EDDM3AQ14507 147 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 SPRNQ5BIV9 151 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 Q8TCH9 128 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 RNASEH2CQ8TDP1 164 aaKnown RBP11.94□□□□□ -0.5
CCDC43-203ENST00000588210 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 MEGF10Q96KG7 1140 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 YPEL1O60688 119 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 FCGR3BO75015 233 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 DEFA4P12838 97 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 GAMTQ14353 236 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 MORN2Q502X0 79 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 ACTL10Q5JWF8 245 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 CCL17Q92583 94 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 YPEL2Q96QA6 119 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 PCGF1Q9BSM1 259 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 BPESC1Q9GZL8 116 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 KCNIP2Q9NS61 270 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 ITPR3Q14573 2671 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 IGKV1D-17A0A075B6S4 117 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 A0A1W2PPQ1 181 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 PRSS46E5RG02 174 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 RNF223E7ERA6 249 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 F6UZH7 168 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 DVL1O14640 695 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 MGST3O14880 152 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 FOSL1P15407 271 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 OPRK1P41145 380 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 GATA4P43694 442 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 VDAC2P45880 294 aaPredicted RBP11.93□□□□□ -0.5
CCDC43-203ENST00000588210 OR4A16Q8NH70 328 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 PPP1R35Q8TAP8 253 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 GCM1Q9NP62 436 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 GNG12Q9UBI6 72 aa11.93□□□□□ -0.5
CCDC43-203ENST00000588210 M0R1X1 148 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 F2RL2O00254 374 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 AMBPP02760 352 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 GPR6P46095 362 aaPredicted RBP11.92□□□□□ -0.5
CCDC43-203ENST00000588210 GNB1P62873 340 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 DEFA6Q01524 100 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 LTC4SQ16873 150 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 KCNIP4Q6PIL6 250 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 LINC01551Q86U37 167 aa11.92□□□□□ -0.5
CCDC43-203ENST00000588210 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
CCDC43-203ENST00000588210 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
CCDC43-203ENST00000588210 TRAV38-1A0A0B4J264 116 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 XKRY2A2RUG3 117 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 CFHR2P36980 270 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 KIR2DS2P43631 304 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 ERVK-16P61578 105 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 PKIAP61925 76 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 LCN2P80188 198 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
CCDC43-203ENST00000588210 GCSAMLQ5JQS6 135 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 IFI27L2Q9H2X8 130 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 TMEM106BQ9NUM4 274 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 CELSR1Q9NYQ6 3014 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 A0A096LNT2 108 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 IFNA10P01566 189 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 USF1P22415 310 aaPredicted RBP11.91□□□□□ -0.5
CCDC43-203ENST00000588210 ATP5G3P48201 142 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 EDDM3BP56851 147 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 LOXL3P58215 753 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 RELBQ01201 579 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 LOXL1Q08397 574 aaPredicted RBP11.91□□□□□ -0.5
CCDC43-203ENST00000588210 TREML4Q6UXN2 200 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 TIMD4Q96H15 378 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 IMMP2LQ96T52 175 aa11.91□□□□□ -0.5
CCDC43-203ENST00000588210 ITGB1BP1O14713 200 aa11.9□□□□□ -0.5
CCDC43-203ENST00000588210 GPX4P36969 197 aaPredicted RBP11.9□□□□□ -0.5
CCDC43-203ENST00000588210 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
CCDC43-203ENST00000588210 BTF3L4Q96K17 158 aa11.9□□□□□ -0.5
CCDC43-203ENST00000588210 MGST2Q99735 147 aa11.9□□□□□ -0.5
CCDC43-203ENST00000588210 GGTLC1Q9BX51 225 aa11.9□□□□□ -0.5
CCDC43-203ENST00000588210 HEYLQ9NQ87 328 aaPredicted RBP11.9□□□□□ -0.5
CCDC43-203ENST00000588210 DYSFO75923 2080 aa11.9□□□□□ -0.5
CCDC43-203ENST00000588210 TSTD3H0UI37 97 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 RRHO14718 337 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 STAG3L2P0CL84 134 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 STAG3L3P0CL85 134 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 DDB2Q92466 427 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 S1PR3Q99500 378 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM140Q9NV12 185 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.51
CCDC43-203ENST00000588210 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
CCDC43-203ENST00000588210 UBE2G2P60604 165 aa11.89□□□□□ -0.51
CCDC43-203ENST00000588210 CST9LP1Q5W188 147 aa11.89□□□□□ -0.51
CCDC43-203ENST00000588210 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
CCDC43-203ENST00000588210 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM178BH3BS89 294 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 CXorf1O96002 111 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 ARL14EPLP0DKL9 152 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms