RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 SNAPC5O75971 98 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 RPL35AP18077 110 aaKnown RBP14.31□□□□□ -0.12
TRAF4-216ENST00000586813 G6PCP35575 357 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 LPAR6P43657 344 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 Q56UQ5 140 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 CADM3Q8N126 398 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 FXYD6Q9H0Q3 95 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 PMP2P02689 132 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-216ENST00000586813 NEDD8Q15843 81 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 CMTM1Q8IZ96 169 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 TMEM217Q8N7C4 229 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 OR5B3Q8NH48 314 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 GALNT14Q96FL9 552 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 S100A16Q96FQ6 103 aaKnown RBP14.3□□□□□ -0.12
TRAF4-216ENST00000586813 ZNF414Q96IQ9 312 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 MAP6D1Q9H9H5 199 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 PRNDQ9UKY0 176 aa14.3□□□□□ -0.12
TRAF4-216ENST00000586813 KLK5Q9Y337 293 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-216ENST00000586813 DBX1A6NMT0 343 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 TAS2R46P59540 309 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 UBE2NLQ5JXB2 153 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 OR5H2Q8NGV7 314 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 TMEM56Q96MV1 263 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 SMPXQ9UHP9 88 aa14.29□□□□□ -0.12
TRAF4-216ENST00000586813 C15orf61A6NNL5 157 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 GPR31O00270 319 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 CTSGP08311 255 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 NAT1P18440 290 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 FCGR2BP31994 310 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-216ENST00000586813 TAS2R20P59543 309 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 TMEM69Q5SWH9 247 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 APRG1Q8IVJ8 170 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 OR1P1Q8NH06 330 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 RNF2Q99496 336 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 TMEM14BQ9NUH8 114 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 FKBP11Q9NYL4 201 aa14.28□□□□□ -0.12
TRAF4-216ENST00000586813 IGHV7-4-1A0A0J9YVY3 117 aa14.27□□□□□ -0.13
TRAF4-216ENST00000586813 NUPL2O15504 423 aaKnown RBP14.27□□□□□ -0.13
TRAF4-216ENST00000586813 TGFBR1P36897 503 aa14.27□□□□□ -0.13
TRAF4-216ENST00000586813 RELQ04864 619 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-216ENST00000586813 CROCCP3Q8IVE0 287 aa14.27□□□□□ -0.13
TRAF4-216ENST00000586813 OR6F1Q8NGZ6 308 aa14.27□□□□□ -0.13
TRAF4-216ENST00000586813 TSC22D3Q99576 134 aa14.27□□□□□ -0.13
TRAF4-216ENST00000586813 C6orf62Q9GZU0 229 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-216ENST00000586813 CHEK1O14757 476 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 ZNF124Q15973 351 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 PHLDA2Q53GA4 152 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 SAMD12Q8N8I0 201 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 TMEM116Q8NCL8 245 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 OR10C1Q96KK4 312 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 RHPN1-AS1Q9BWJ2 59 aa14.26□□□□□ -0.13
TRAF4-216ENST00000586813 IGHV3-49A0A0A0MS15 119 aa14.25□□□□□ -0.13
TRAF4-216ENST00000586813 I3L2K1 104 aa14.25□□□□□ -0.13
TRAF4-216ENST00000586813 YIF1AO95070 293 aa14.25□□□□□ -0.13
TRAF4-216ENST00000586813 HRH1P35367 487 aa14.25□□□□□ -0.13
TRAF4-216ENST00000586813 PHLDA1Q8WV24 401 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-216ENST00000586813 SLC25A46Q96AG3 418 aa14.25□□□□□ -0.13
TRAF4-216ENST00000586813 MISP3Q96FF7 219 aa14.25□□□□□ -0.13
TRAF4-216ENST00000586813 PRSS3P35030 304 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 TFPI2P48307 235 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 MFAP4P55083 255 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 KCTD21Q4G0X4 260 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 LYSMD2Q8IV50 215 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 RPP25LQ8N5L8 163 aaKnown RBP14.24□□□□□ -0.13
TRAF4-216ENST00000586813 ZNF114Q8NC26 417 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 TXN2Q99757 166 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 NXF2Q9GZY0 626 aaKnown RBP14.24□□□□□ -0.13
TRAF4-216ENST00000586813 CSTL1Q9H114 145 aa14.24□□□□□ -0.13
TRAF4-216ENST00000586813 FAM212BQ9NTI7 297 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-216ENST00000586813 IGKV3-7A0A075B6H7 116 aa14.23□□□□□ -0.13
TRAF4-216ENST00000586813 MPTX1A8MV57 137 aa14.23□□□□□ -0.13
TRAF4-216ENST00000586813 MT-CO2P00403 227 aa14.23□□□□□ -0.13
TRAF4-216ENST00000586813 HLA-DMAP28067 261 aa14.23□□□□□ -0.13
TRAF4-216ENST00000586813 RPS19P39019 145 aaKnown RBP14.23□□□□□ -0.13
TRAF4-216ENST00000586813 FAM90A2PQ658T7 463 aa14.23□□□□□ -0.13
TRAF4-216ENST00000586813 SEC22AQ96IW7 307 aa14.23□□□□□ -0.13
TRAF4-216ENST00000586813 IGHV3-48P01763 117 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 S100GP29377 79 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 CMC4P56277 68 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-216ENST00000586813 PRCDQ00LT1 54 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 LPCAT3Q6P1A2 487 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 H2BFWTQ7Z2G1 175 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 TBC1D26Q86UD7 250 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 OR4A16Q8NH70 328 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 GATAD1Q8WUU5 269 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 CMTM3Q96MX0 182 aa14.22□□□□□ -0.13
TRAF4-216ENST00000586813 IGHV3OR16-13A0A075B7E8 117 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 TRAV14DV4A0A0A6YYC5 116 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 IGHV3-74A0A0B4J1X5 117 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 IGKV1-39P01597 117 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 IGKV1D-39P04432 117 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 GBGT1Q8N5D6 347 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 GPX8Q8TED1 209 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 MRGPRFQ96AM1 343 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 PINX1Q96BK5 328 aaKnown RBP14.21□□□□□ -0.13
TRAF4-216ENST00000586813 RARRES2Q99969 163 aa14.21□□□□□ -0.13
TRAF4-216ENST00000586813 DNAH10Q8IVF4 4471 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms