RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 SUB1P53999 127 aaKnown RBP eCLIP17.87■□□□□ 0.454e-8■□□□□ 10.8
CIRBP-208ENST00000586548 RAB31Q13636 194 aa17.87■□□□□ 0.45
CIRBP-208ENST00000586548 PMS2P11Q13670 270 aa17.87■□□□□ 0.45
CIRBP-208ENST00000586548 ICAM4Q14773 271 aa17.87■□□□□ 0.45
CIRBP-208ENST00000586548 FAM122CQ6P4D5 195 aa17.87■□□□□ 0.45
CIRBP-208ENST00000586548 FAM168AQ92567 244 aa17.87■□□□□ 0.45
CIRBP-208ENST00000586548 LOC102723971A0A1B0GUV8 181 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 HSPB1P04792 205 aaKnown RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 RPL27AP46776 148 aaKnown RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 FGF8P55075 233 aaPredicted RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 TNXAQ16473 311 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 CCDC144NLQ6NUI1 221 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 TMEM144Q7Z5S9 345 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 PPP1R27Q86WC6 154 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 GNG13Q9P2W3 67 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 POLR3KQ9Y2Y1 108 aaPredicted RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 PXMP4Q9Y6I8 212 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 USP9XQ93008 2570 aaPredicted RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 SEC14L6B5MCN3 397 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 TOX4O94842 621 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 OR13C7P0DN81 318 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 COMPP49747 757 aaPredicted RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 CD69Q07108 199 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 RNASEH2CQ8TDP1 164 aaKnown RBP17.86■□□□□ 0.45
CIRBP-208ENST00000586548 CACNG8Q8WXS5 425 aa17.86■□□□□ 0.45
CIRBP-208ENST00000586548 YIF1AO95070 293 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 IFNA1P01562 189 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 BCL2P10415 239 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 GPX4P36969 197 aaPredicted RBP17.85■□□□□ 0.45
CIRBP-208ENST00000586548 CDC34P49427 236 aaPredicted RBP17.85■□□□□ 0.45
CIRBP-208ENST00000586548 MIC13Q5XKP0 118 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 C10orf105Q8TEF2 133 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 RAB24Q969Q5 203 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 FBXL15Q9H469 300 aa17.85■□□□□ 0.45
CIRBP-208ENST00000586548 A0A1W2PRD5 423 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 A0A1W2PRF3 423 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 A0A1W2PRM7 423 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 IGLC7A0M8Q6 106 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 SRP19P09132 144 aaKnown RBP17.84■□□□□ 0.45
CIRBP-208ENST00000586548 LGALS4P56470 323 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 SRSF1Q07955 248 aaKnown RBP eCLIP17.84■□□□□ 0.451e-12■□□□□ 8.7
CIRBP-208ENST00000586548 SUN5Q8TC36 379 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 TBX15Q96SF7 602 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 P2RX4Q99571 388 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 TBL2Q9Y4P3 447 aaKnown RBP17.84■□□□□ 0.45
CIRBP-208ENST00000586548 AKAP6Q13023 2319 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 MOSP00540 346 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 RPL29P47914 159 aaKnown RBP17.84■□□□□ 0.45
CIRBP-208ENST00000586548 ATP5J2P56134 94 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 GAMTQ14353 236 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 ZNF114Q8NC26 417 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 RXFP4Q8TDU9 374 aa17.84■□□□□ 0.45
CIRBP-208ENST00000586548 FLNCQ14315 2725 aa17.83■□□□□ 0.45
CIRBP-208ENST00000586548 ZFP92A6NM28 416 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 VWC2LB2RUY7 222 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 NPBWR1P48145 328 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 UBE2E1P51965 193 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 B2MP61769 119 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 CLEC2AQ6UVW9 174 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 SLC16A13Q7RTY0 426 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 NPBQ8NG41 125 aa17.83■□□□□ 0.44
CIRBP-208ENST00000586548 SPTAN1Q13813 2472 aaKnown RBP17.82■□□□□ 0.44
CIRBP-208ENST00000586548 NBR2O15453 112 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 COX6B1P14854 86 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 PLGLAQ15195 96 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 MMDQ15546 238 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 SSX2Q16385 188 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 GCSAMLQ5JQS6 135 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 SOHLH1Q5JUK2 328 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-208ENST00000586548 CLRN3Q8NCR9 226 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 SSMEM1Q8WWF3 244 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 SLC35E1Q96K37 410 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 ZNF462Q96JM2 2506 aa17.82■□□□□ 0.44
CIRBP-208ENST00000586548 EIF3GO75821 320 aaKnown RBP eCLIP17.81■□□□□ 0.44
CIRBP-208ENST00000586548 NDUFA3O95167 84 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 PVRIGQ6DKI7 326 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 RBMS3Q6XE24 437 aaKnown RBP17.81■□□□□ 0.44
CIRBP-208ENST00000586548 STPG3Q8N7X2 389 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 OR2T10Q8NGZ9 312 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 EAF1Q96JC9 268 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-208ENST00000586548 DNASE2O00115 360 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-208ENST00000586548 TAGLN2P37802 199 aaKnown RBP17.81■□□□□ 0.44
CIRBP-208ENST00000586548 GNB1P62873 340 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 PRR20EP86478 221 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 PRR20CP86479 221 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 PRR20DP86480 221 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 PRR20BP86481 221 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 PRR20AP86496 221 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 TMEM249Q2WGJ8 235 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 DYNAPQ8N1N2 210 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 VAX2Q9UIW0 290 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 SLC45A2Q9UMX9 530 aa17.81■□□□□ 0.44
CIRBP-208ENST00000586548 MYO18BQ8IUG5 2567 aa17.8■□□□□ 0.44
CIRBP-208ENST00000586548 A0A1W2PPV4 95 aa17.8■□□□□ 0.44
CIRBP-208ENST00000586548 HMGB3O15347 200 aaKnown RBP17.8■□□□□ 0.44
CIRBP-208ENST00000586548 SNRNP70P08621 437 aaKnown RBP17.8■□□□□ 0.44
CIRBP-208ENST00000586548 SRSF8Q9BRL6 282 aaKnown RBP17.8■□□□□ 0.44
CIRBP-208ENST00000586548 IGKV1OR2-108A0A075B7D4 117 aa17.79■□□□□ 0.44
CIRBP-208ENST00000586548 IGHV4-61A0A0C4DH41 118 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms