RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 SSBP1Q04837 148 aaKnown RBP13.47□□□□□ -0.25
SRSF1-209ENST00000585096 TM4SF20Q53R12 229 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 TERB2Q8NHR7 220 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 MUC7Q8TAX7 377 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 ZFAND1Q8TCF1 268 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 SCARB1Q8WTV0 552 aa13.47□□□□□ -0.25
SRSF1-209ENST00000585096 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-209ENST00000585096 ZNF436Q9C0F3 470 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-209ENST00000585096 MRPL27Q9P0M9 148 aaKnown RBP13.47□□□□□ -0.25
SRSF1-209ENST00000585096 IGHV3-35A0A0C4DH35 117 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 CTDSP2O14595 271 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 CD7P09564 240 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 PI3P19957 117 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 TMBIM6P55061 237 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 HSPE1P61604 102 aaKnown RBP13.46□□□□□ -0.25
SRSF1-209ENST00000585096 ANKRD55Q3KP44 614 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 STEAP1BQ6NZ63 245 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 TMEM61Q8N0U2 210 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 CCDC71LQ8N9Z2 235 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 CITED4Q96RK1 184 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 BCL7BQ9BQE9 202 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 GAR1Q9NY12 217 aaKnown RBP13.46□□□□□ -0.25
SRSF1-209ENST00000585096 COPZ2Q9P299 210 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 RABL2AQ9UBK7 228 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-209ENST00000585096 MLXQ9UH92 298 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 RABL2BQ9UNT1 228 aa13.46□□□□□ -0.25
SRSF1-209ENST00000585096 KMT2CQ8NEZ4 4911 aaKnown RBP13.46□□□□□ -0.26
SRSF1-209ENST00000585096 IGHV3-21A0A0B4J1V1 117 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 TRAV25A0A0B4J276 109 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 C3orf85A0A1B0GTC6 90 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 C8orf88P0DMB2 117 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 PPP5CP53041 499 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 PRCDQ00LT1 54 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 MEF2DQ14814 521 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 SCGB2B2Q4G0G5 96 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 Q56UQ5 140 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 BTNL8Q6UX41 500 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
SRSF1-209ENST00000585096 OR2C3Q8N628 320 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 DEFB125Q8N687 156 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 OR4D10Q8NGI6 311 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 TMEM190Q8WZ59 177 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 NBEAL2Q6ZNJ1 2754 aa13.45□□□□□ -0.26
SRSF1-209ENST00000585096 K7EIM0 57 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 NDUFA4O00483 81 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
SRSF1-209ENST00000585096 AKR1C2P52895 323 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
SRSF1-209ENST00000585096 TRIM16LQ309B1 348 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-209ENST00000585096 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 DIRAS2Q96HU8 199 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 TP53RKQ96S44 253 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 CCDC59Q9P031 241 aaKnown RBP13.44□□□□□ -0.26
SRSF1-209ENST00000585096 SELENOKQ9Y6D0 94 aa13.44□□□□□ -0.26
SRSF1-209ENST00000585096 B3GALNT1O75752 331 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 SCAF4O95104 1147 aaKnown RBP13.43□□□□□ -0.26
SRSF1-209ENST00000585096 IL18Q14116 193 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 ZNF114Q8NC26 417 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 OR13C8Q8NGS7 320 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 DYNC2LI1Q8TCX1 351 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 SMIM4Q8WVI0 70 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 ISOC1Q96CN7 298 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 C5orf66Q9H5L9 145 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
SRSF1-209ENST00000585096 DAZ1Q9NQZ3 744 aaKnown RBP13.43□□□□□ -0.26
SRSF1-209ENST00000585096 DISC1C4P0D8 188 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 CTDSPLO15194 276 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 CTSDP07339 412 aaPredicted RBP13.42□□□□□ -0.26
SRSF1-209ENST00000585096 LYL1P12980 280 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 RPL5P46777 297 aaKnown RBP13.42□□□□□ -0.26
SRSF1-209ENST00000585096 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 TXN2Q99757 166 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 CHRDL1Q9BU40 450 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 PDCD10Q9BUL8 212 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 C20orf24Q9BUV8 137 aa13.42□□□□□ -0.26
SRSF1-209ENST00000585096 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
SRSF1-209ENST00000585096 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-209ENST00000585096 I3L2K1 104 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 K7EMT4 169 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 NUPL2O15504 423 aaKnown RBP13.41□□□□□ -0.26
SRSF1-209ENST00000585096 IFNA17P01571 189 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 FCGR2BP31994 310 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-209ENST00000585096 ADMP35318 185 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 SNCAP37840 140 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 MFAP4P55083 255 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 RELQ04864 619 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-209ENST00000585096 IZUMO4Q1ZYL8 232 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 SP6Q3SY56 376 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 CASC10Q5T4H9 136 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 LAMTOR1Q6IAA8 161 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms