RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ATG12O94817 140 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 CTSDP07339 412 aaPredicted RBP15.48■□□□□ 0.07
SS18-224ENST00000584083 AKR1C2P52895 323 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 MFAP2P55001 183 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 IZUMO4Q1ZYL8 232 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 CD300EQ496F6 205 aaPredicted RBP15.48■□□□□ 0.07
SS18-224ENST00000584083 GTSCR1Q86UQ5 136 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 SBSPONQ8IVN8 264 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 OR4C16Q8NGL9 310 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 OR1L6Q8NGR2 347 aa15.48■□□□□ 0.07
SS18-224ENST00000584083 IGHV3-21A0A0B4J1V1 117 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 IGKV1-5P01602 117 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 IGHV4-30-4P0DP06 118 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 EDN2P20800 178 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 CBLN1P23435 193 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 HSPE1P61604 102 aaKnown RBP15.47■□□□□ 0.07
SS18-224ENST00000584083 DEFB114Q30KQ6 69 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 WWC2-AS2Q96NR7 200 aa15.47■□□□□ 0.07
SS18-224ENST00000584083 IGHV3-35A0A0C4DH35 117 aa15.46■□□□□ 0.07
SS18-224ENST00000584083 TEX13DA0A0J9YY54 714 aaPredicted RBP15.46■□□□□ 0.07
SS18-224ENST00000584083 GSTZ1O43708 216 aaPredicted RBP15.46■□□□□ 0.07
SS18-224ENST00000584083 PRCDQ00LT1 54 aa15.46■□□□□ 0.07
SS18-224ENST00000584083 RNASE11Q8TAA1 199 aaKnown RBP15.46■□□□□ 0.07
SS18-224ENST00000584083 CACNG8Q8WXS5 425 aa15.46■□□□□ 0.07
SS18-224ENST00000584083 NXF2Q9GZY0 626 aaKnown RBP15.46■□□□□ 0.07
SS18-224ENST00000584083 C21orf62Q9NYP8 219 aa15.46■□□□□ 0.07
SS18-224ENST00000584083 TECRQ9NZ01 308 aaKnown RBP15.46■□□□□ 0.07
SS18-224ENST00000584083 ANKRD20A5PA0PJZ0 165 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 OR2T8A6NH00 312 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 TGOLN2O43493 480 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 OR2C3Q8N628 320 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 OR1P1Q8NH06 330 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 SCARB1Q8WTV0 552 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 RRNAD1Q96FB5 475 aaKnown RBP15.45■□□□□ 0.06
SS18-224ENST00000584083 MISP3Q96FF7 219 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 PRRT1Q99946 306 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 PLEKHA3Q9HB20 300 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 PALMDQ9NP74 551 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 SELENOKQ9Y6D0 94 aa15.45■□□□□ 0.06
SS18-224ENST00000584083 TMEM213A2RRL7 107 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 A8MWP6 167 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 B3GALNT1O75752 331 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 UCP1P25874 307 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 ERHP84090 104 aaKnown RBP15.44■□□□□ 0.06
SS18-224ENST00000584083 SURF2Q15527 256 aaPredicted RBP15.44■□□□□ 0.06
SS18-224ENST00000584083 GUCA2BQ16661 112 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 TM4SF20Q53R12 229 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 SPINK9Q5DT21 86 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 UNQ9165/PRO28630Q6UXU0 137 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 UBAC2Q8NBM4 344 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 UXS1Q8NBZ7 420 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 OR51S1Q8NGJ8 323 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 BSCL2Q96G97 398 aaPredicted RBP15.44■□□□□ 0.06
SS18-224ENST00000584083 SOSTQ9BQB4 213 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 RTBDNQ9BSG5 229 aaPredicted RBP15.44■□□□□ 0.06
SS18-224ENST00000584083 THAP7Q9BT49 309 aaPredicted RBP15.44■□□□□ 0.06
SS18-224ENST00000584083 TUBA4BQ9H853 241 aa15.44■□□□□ 0.06
SS18-224ENST00000584083 A0A0B4J293 547 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 K7EIM0 57 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 IFNA17P01571 189 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 OR5AC1P0C628 307 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 Q56UQ5 140 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 SPSB3Q6PJ21 355 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 SLC35G3Q8N808 338 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 PDCD10Q9BUL8 212 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 NAA60Q9H7X0 242 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 C19orf73Q9NVV2 129 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 MCUBQ9NWR8 336 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
SS18-224ENST00000584083 ZNF785A8K8V0 405 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 A8MZ25 164 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 ST8SIA3O43173 380 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 P0C879 139 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 CD81P60033 236 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 ZNF57Q68EA5 555 aaPredicted RBP15.42■□□□□ 0.06
SS18-224ENST00000584083 ZNF436Q9C0F3 470 aaPredicted RBP15.42■□□□□ 0.06
SS18-224ENST00000584083 TMEM222Q9H0R3 208 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 C5orf66Q9H5L9 145 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 ZMAT4Q9H898 229 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 SLC2A8Q9NY64 477 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 SCP2D1Q9UJQ7 156 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 GPR132Q9UNW8 380 aa15.42■□□□□ 0.06
SS18-224ENST00000584083 S100A5P33763 92 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 SNCAP37840 140 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 PYDC2Q56P42 97 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 ZNF114Q8NC26 417 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 MARC2Q969Z3 335 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 WDR89Q96FK6 387 aaPredicted RBP15.41■□□□□ 0.06
SS18-224ENST00000584083 RCHY1Q96PM5 261 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 ATP6V0BQ99437 205 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 NEURL2Q9BR09 285 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 GAR1Q9NY12 217 aaKnown RBP15.41■□□□□ 0.06
SS18-224ENST00000584083 MLXQ9UH92 298 aa15.41■□□□□ 0.06
SS18-224ENST00000584083 CDS2O95674 445 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 ETV6P41212 452 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 MFAP4P55083 255 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 ELLP55199 621 aaPredicted RBP15.4■□□□□ 0.06
SS18-224ENST00000584083 DHODHQ02127 395 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 GLYATL2Q8WU03 294 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 PINX1Q96BK5 328 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms