RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 RASSF5Q8WWW0 418 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 TMEM234Q8WY98 164 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 SLC7A6Q92536 515 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 EEF1AKMT3Q96AZ1 226 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 S100PBPQ96BU1 408 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 SGTBQ96EQ0 304 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 SLC25A44Q96H78 314 aaPredicted RBP1.57□□□□□ -2.16
VAPA-206ENST00000583475 NMNAT3Q96T66 252 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 SFXN3Q9BWM7 321 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 TXNIPQ9H3M7 391 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 CMC2Q9NRP2 79 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 TMEM38BQ9NVV0 291 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 CLN6Q9NWW5 311 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 SDHAF2Q9NX18 166 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 DUX4Q9UBX2 424 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 ING4Q9UNL4 249 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 SAMHD1Q9Y3Z3 626 aaKnown RBP1.57□□□□□ -2.16
VAPA-206ENST00000583475 AP4S1Q9Y587 144 aa1.57□□□□□ -2.16
VAPA-206ENST00000583475 NOTCH1P46531 2555 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 MGAM2Q2M2H8 2515 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 IGLV3-9A0A075B6K5 115 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TRAV8-7A0A075B6U6 113 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 IGHV2OR16-5A0A0B4J2B6 119 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 ANKRD20A5PA0PJZ0 165 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TVP23AA6NH52 213 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR5H1A6NKK0 313 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 EFCAB9A8MZ26 197 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 C5orf58C9J3I9 102 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CLDN34H7C241 214 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 M0QXV9 152 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TNFRSF11BO00300 401 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 MRPS12O15235 138 aaKnown RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 RER1O15258 196 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SGCEO43556 437 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 GATCO43716 136 aaKnown RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR2T1O43869 369 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 EIF1BO60739 113 aaKnown RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 TRAPPC6AO75865 159 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 LYZL6O75951 148 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 NDUFB2O95178 105 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SOD3P08294 240 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CECR9P0C854 216 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CD37P11049 281 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 GABRA1P14867 456 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CXCR1P25024 350 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 HLA-DMAP28067 261 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 PYCR1P32322 319 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TGFBR2P37173 567 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CEACAM3P40198 252 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 RAB7AP51149 207 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 HCCSP53701 268 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TAS2R41P59536 307 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 B2MP61769 119 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SNRPGP62308 76 aaKnown RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 SLC35A2P78381 396 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 PSG4Q00888 419 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 PLGLB1Q02325 96 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 MXD1Q05195 221 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TPBGQ13641 420 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 APOFQ13790 326 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 MAD2L1BPQ15013 274 aaPredicted RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 TAL2Q16559 108 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SLC25A35Q3KQZ1 300 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 ORMDL2Q53FV1 153 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TEX30Q5JUR7 227 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SPIN3Q5JUX0 258 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CLEC12AQ5QGZ9 265 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 NCMAPQ5T1S8 102 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TPTE2P1Q5T6R2 138 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 FAM27BQ5VT28 67 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 UBE2UQ5VVX9 321 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 THOC7Q6I9Y2 204 aaKnown RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 LINC00336Q6ZUF6 198 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 AHSA2Q719I0 299 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SLC16A13Q7RTY0 426 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 NAA40Q86UY6 237 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 MDP1Q86V88 176 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR9Q1Q8NGQ5 310 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR10AC1Q8NH08 325 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR4K13Q8NH42 304 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 ZNF563Q8TA94 476 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 PIGXQ8TBF5 258 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 RNF133Q8WVZ7 376 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 C11orf40Q8WZ69 217 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 RNASE6Q93091 150 aaKnown RBP1.56□□□□□ -2.16
VAPA-206ENST00000583475 RPEQ96AT9 228 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 DDIT4LQ96D03 193 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 SEH1LQ96EE3 360 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 PGLYRP3Q96LB9 341 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 C9orf16Q9BUW7 83 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR2H1Q9GZK4 316 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 OR51V1Q9H2C8 321 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 DUSP21Q9H596 190 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 PLEKHA1Q9HB21 404 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 TMEM27Q9HBJ8 222 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 INIPQ9NRY2 104 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 FAM206AQ9NX38 181 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 GLTPQ9NZD2 209 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 CYB5R1Q9UHQ9 305 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 FBXL3Q9UKT7 428 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms