RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 C2CD4DB7Z1M9 353 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 C21orf140B9A014 251 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 LSM6P62312 80 aaKnown RBP6.37□□□□□ -1.39
CMTM4-205ENST00000581487 SSBP2P81877 361 aaPredicted RBP6.37□□□□□ -1.39
CMTM4-205ENST00000581487 TRA2AQ13595 282 aaKnown RBP eCLIP6.37□□□□□ -1.39
CMTM4-205ENST00000581487 ATP6V0BQ99437 205 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 RNF122Q9H9V4 155 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 MIA3Q5JRA6 1907 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 A0A1B0GWJ7 208 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 RNASE4P34096 147 aaKnown RBP6.37□□□□□ -1.39
CMTM4-205ENST00000581487 NBL1P41271 181 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 ATP5J2P56134 94 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 AQP3Q92482 292 aa6.37□□□□□ -1.39
CMTM4-205ENST00000581487 PHF7Q9BWX1 381 aaPredicted RBP6.37□□□□□ -1.39
CMTM4-205ENST00000581487 ZNF561-AS1K7EIQ3 104 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 TNFSF13O75888 250 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 PPYP01298 95 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 OCIAD2Q56VL3 154 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE2AQ6NT46 116 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 OR51B2Q9Y5P1 312 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 TRAV5A0A0B4J249 113 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE12JA6NER3 117 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE1Q13065 139 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE4Q13068 117 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE5Q13069 117 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE6Q13070 117 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 LRTM2Q8N967 370 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 SDF2L1Q9HCN8 221 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 CCL28Q9NRJ3 127 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 A0A087WWC5 75 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE12BA1L429 117 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 MORN3Q6PF18 240 aaPredicted RBP6.36□□□□□ -1.39
CMTM4-205ENST00000581487 ZNF721Q8TF20 911 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GNG3P63215 75 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 OR5P3Q8WZ94 311 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 C10orf35Q96D05 121 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 NAA38Q9BRA0 125 aaKnown RBP6.36□□□□□ -1.39
CMTM4-205ENST00000581487 TRAV12-2A0A075B6T6 113 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 TCRBV4S1A1TA0A5B7 111 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 IFI6P09912 130 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 GAGE13Q4V321 117 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 SP5Q6BEB4 398 aaPredicted RBP6.36□□□□□ -1.39
CMTM4-205ENST00000581487 RFESDQ8TAC1 157 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 RMI2Q96E14 147 aa6.36□□□□□ -1.39
CMTM4-205ENST00000581487 KIAA0100Q14667 2235 aaKnown RBP6.36□□□□□ -1.39
CMTM4-205ENST00000581487 SRD5A2P31213 254 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 PDLIM4P50479 330 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 CCL7P80098 99 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 MRGPRFQ96AM1 343 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SCN8AQ9UQD0 1980 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SCN4AP35499 1836 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 COL5A3P25940 1745 aaPredicted RBP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 IGHV3OR16-10A0A075B7F0 116 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 A0A1W2PQF6 199 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SERF1AO75920 110 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 CD5P06127 495 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 WBP1LQ9NX94 342 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 NDUFB1O75438 58 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 VDAC2P45880 294 aaPredicted RBP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SRSF7Q16629 238 aaKnown RBP eCLIP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 C1orf122Q6ZSJ8 110 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SPEM1Q8N4L4 309 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 CTHRC1Q96CG8 243 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 ZNF414Q96IQ9 312 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 PLA2G3Q9NZ20 509 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 A0A1W2PPE3 182 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 E9PQ18 207 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 MLNRO43193 412 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 HYPMO75409 117 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 TRACP01848 142 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 PYY3Q5JQD4 70 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 C1orf194Q5T5A4 169 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 C9orf153Q5TBE3 101 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 TMEM170AQ8WVE7 144 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 TMEM45BQ96B21 275 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 RCC1LQ96I51 464 aaKnown RBP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 ZNF479Q96JC4 524 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 QSER1Q2KHR3 1735 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 IL6RP08887 468 aaPredicted RBP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 RPS11P62280 158 aaKnown RBP eCLIP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 ZP4Q12836 540 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 HEPN1Q6WQI6 88 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SCNM1Q9BWG6 230 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SMIM10L1P0DMW3 83 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
CMTM4-205ENST00000581487 GPHB5Q86YW7 130 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 SMIM10Q96HG1 83 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 TIMM17AQ99595 171 aa6.35□□□□□ -1.39
CMTM4-205ENST00000581487 DOCK1Q14185 1865 aa6.34□□□□□ -1.39
CMTM4-205ENST00000581487 C2orf68Q2NKX9 166 aa6.34□□□□□ -1.39
CMTM4-205ENST00000581487 RASL10BQ96S79 203 aa6.34□□□□□ -1.39
CMTM4-205ENST00000581487 ZMAT4Q9H898 229 aa6.34□□□□□ -1.39
CMTM4-205ENST00000581487 LOC105371242A0A075B767 164 aa6.34□□□□□ -1.39
CMTM4-205ENST00000581487 PPIAL4CA0A0B4J2A2 164 aa6.34□□□□□ -1.39
CMTM4-205ENST00000581487 VENTXO95231 258 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms