RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 LRRN3E7EW58 273 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 SLC16A4O15374 487 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 RPS12P25398 132 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 CA5AP35218 305 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 SLCO1A2P46721 670 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 REG1BP48304 166 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 SLC38A11Q08AI6 406 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 LRRC75BQ2VPJ9 315 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 CDKL4Q5MAI5 379 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 C1orf194Q5T5A4 169 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 C1orf195Q5TG92 126 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 OR10K2Q6IF99 312 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 EDC4Q6P2E9 1401 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 C5orf46Q6UWT4 87 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 SPACA4Q8TDM5 124 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 TESCQ96BS2 214 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 FKBP14Q9NWM8 211 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 MUC6Q6W4X9 2439 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 ANKRD36BQ8N2N9 1353 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 CUL9Q8IWT3 2517 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 OTOGLQ3ZCN5 2332 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 TTC21AQ8NDW8 1320 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 MON2Q7Z3U7 1717 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 TOGARAM1Q9Y4F4 1720 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 KDM6AO15550 1401 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 FN1P02751 2386 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 SMG6Q86US8 1419 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 TMEM269A0A1B0GVZ9 245 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 C21orf140B9A014 251 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 KLRC4O43908 158 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 CCL1P22362 96 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 FXYD7P58549 80 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 TMEM258P61165 79 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 AP1S1P61966 158 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 MIAQ16674 131 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 ZNF791Q3KP31 576 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 RAB8BQ92930 207 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 C3orf18Q9UK00 162 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 RBM7Q9Y580 266 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 PXMP4Q9Y6I8 212 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 V9GYY5 206 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 RTL1A6NKG5 1358 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 ADCY9O60503 1353 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 CICQ96RK0 1608 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 NUMA1Q14980 2115 aa1.69□□□□□ -2.14
SMCHD1-205ENST00000581383 BCL9O00512 1426 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 C10orf71Q711Q0 1435 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 RGPD3A6NKT7 1758 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 AKAP12Q02952 1782 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 RGPD4Q7Z3J3 1758 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 KCPQ6ZWJ8 1503 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 EVPLLA8MZ36 301 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 DISC1C4P0D8 188 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 PGLYRP1O75594 196 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 MAP2K4P45985 399 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 IDH3GP51553 393 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 CLVS2Q5SYC1 327 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 OR1L8Q8NGR8 309 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 DIRAS2Q96HU8 199 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 IMMP2LQ96T52 175 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 OR51I2Q9H344 312 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 GPR84Q9NQS5 396 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 PRELID1Q9Y255 219 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 FLT4P35916 1363 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 MAP3K5Q99683 1374 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 GOLGB1Q14789 3259 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 BTAF1O14981 1849 aa1.68□□□□□ -2.14
SMCHD1-205ENST00000581383 USP54Q70EL1 1684 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 PTPRBP23467 1997 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 C4BP0C0L5 1744 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 PLA2G10O15496 165 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 GPX1P07203 203 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 DEFA4P12838 97 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 MYL12AP19105 171 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 GLO1Q04760 184 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 LYZL1Q6UWQ5 148 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 SLC22A24Q8N4F4 322 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 OR8B12Q8NGG6 310 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 SGMS2Q8NHU3 365 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 TMA16Q96EY4 203 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 TIMM9Q9Y5J7 89 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 CEP350Q5VT06 3117 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 LTN1O94822 1766 aa1.67□□□□□ -2.14
SMCHD1-205ENST00000581383 CR1P17927 2039 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 IGHV3-64A0A075B6Q5 118 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 IGHV1-69-2A0A0G2JMI3 117 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 OR4C45A6NMZ5 311 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 ZNF705FA8MVS1 300 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 H3BT86 120 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 LST1O00453 97 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 CCR7P32248 378 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 AP2S1P53680 142 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 TPI1P60174 286 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 RPL30P62888 115 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 RELAQ04206 551 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 BATFQ16520 125 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 CD200R1LQ6Q8B3 271 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 ZNF705AQ6ZN79 300 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 GID4Q8IVV7 300 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms