RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FCGR2BP31994 310 aaPredicted RBP7.82□□□□□ -1.16
RFFL-209ENST00000581265 RFX2P48378 723 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
RFFL-209ENST00000581265 CMTM1Q8IZ96 169 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 OR5B3Q8NH48 314 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 S100A16Q96FQ6 103 aaKnown RBP7.82□□□□□ -1.16
RFFL-209ENST00000581265 ZNF414Q96IQ9 312 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 HINT2Q9BX68 163 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 FKBP11Q9NYL4 201 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 EHFQ9NZC4 300 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 PRNDQ9UKY0 176 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 ANAPC10Q9UM13 185 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 NSG2Q9Y328 171 aa7.82□□□□□ -1.16
RFFL-209ENST00000581265 RYR1P21817 5038 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 IGHV3OR16-8A0A075B7F1 116 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 MEIS3P1A6NDR6 274 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 ZNF207O43670 478 aaKnown RBP7.81□□□□□ -1.16
RFFL-209ENST00000581265 RLN1P04808 185 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 RPL35AP18077 110 aaKnown RBP7.81□□□□□ -1.16
RFFL-209ENST00000581265 NAT1P18440 290 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 G6PCP35575 357 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 Q56UQ5 140 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 UBAC2Q8NBM4 344 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 OR6F1Q8NGZ6 308 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 OR1P1Q8NH06 330 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 OR10C1Q96KK4 312 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 RNF2Q99496 336 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 TXN2Q99757 166 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 ZNF2Q9BSG1 426 aaPredicted RBP7.81□□□□□ -1.16
RFFL-209ENST00000581265 RHPN1-AS1Q9BWJ2 59 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 C6orf62Q9GZU0 229 aaPredicted RBP7.81□□□□□ -1.16
RFFL-209ENST00000581265 CSTL1Q9H114 145 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 Q9H521 79 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 IFT46Q9NQC8 304 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 TMEM14BQ9NUH8 114 aa7.81□□□□□ -1.16
RFFL-209ENST00000581265 IGHV7-4-1A0A0J9YVY3 117 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 DBX1A6NMT0 343 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 GPR31O00270 319 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 CHEK1O14757 476 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 NUPL2O15504 423 aaKnown RBP7.8□□□□□ -1.16
RFFL-209ENST00000581265 TAS2R46P59540 309 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 RELQ04864 619 aaPredicted RBP7.8□□□□□ -1.16
RFFL-209ENST00000581265 FAM90A2PQ658T7 463 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 LGALS9CQ6DKI2 356 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 LYSMD2Q8IV50 215 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 CROCCP3Q8IVE0 287 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 APRG1Q8IVJ8 170 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 TMEM116Q8NCL8 245 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 TSPAN14Q8NG11 270 aa7.8□□□□□ -1.16
RFFL-209ENST00000581265 PHLDA1Q8WV24 401 aaPredicted RBP7.8□□□□□ -1.16
RFFL-209ENST00000581265 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
RFFL-209ENST00000581265 TRAV14DV4A0A0A6YYC5 116 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 C15orf61A6NNL5 157 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 MPTX1A8MV57 137 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 I3L2K1 104 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 DEDDO75618 318 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 PMP2P02689 132 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 CD5P06127 495 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 MFAP4P55083 255 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 OR5H2Q8NGV7 314 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 SLC25A46Q96AG3 418 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 RARRES2Q99969 163 aa7.79□□□□□ -1.16
RFFL-209ENST00000581265 NXF2Q9GZY0 626 aaKnown RBP7.79□□□□□ -1.16
RFFL-209ENST00000581265 KMT2AQ03164 3969 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 YIF1AO95070 293 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 PRSS3P35030 304 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 RPS19P39019 145 aaKnown RBP7.78□□□□□ -1.16
RFFL-209ENST00000581265 NEDD8Q15843 81 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 ZNF124Q15973 351 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 UBE2NLQ5JXB2 153 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 TMEM69Q5SWH9 247 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 LPCAT3Q6P1A2 487 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 ZNF114Q8NC26 417 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 SEC22AQ96IW7 307 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 CMTM3Q96MX0 182 aa7.78□□□□□ -1.16
RFFL-209ENST00000581265 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 ATP6V1G2O95670 118 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 MT-CO2P00403 227 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 S100GP29377 79 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 HRH1P35367 487 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 TFPI2P48307 235 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 TAS2R20P59543 309 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.17
RFFL-209ENST00000581265 PAFAH1B2P68402 229 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 PHLDA2Q53GA4 152 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 H2BFWTQ7Z2G1 175 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 SAMD12Q8N8I0 201 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 OR11H2Q8NH07 326 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 OR4A16Q8NH70 328 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 C11orf45Q8TAV5 145 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 MISP3Q96FF7 219 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 MFFQ9GZY8 342 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 FXYD6Q9H0Q3 95 aa7.77□□□□□ -1.17
RFFL-209ENST00000581265 C11orf68Q9H3H3 251 aaKnown RBP7.77□□□□□ -1.17
RFFL-209ENST00000581265 FRAS1Q86XX4 4008 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 GNG7O60262 68 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 DFFBO76075 338 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 IGKV1-39P01597 117 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms