RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NOXA1Q86UR1 476 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 OR2C3Q8N628 320 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 UXS1Q8NBZ7 420 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 OR1P1Q8NH06 330 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 MED28Q9H204 178 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 C5orf51A6NDU8 294 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 HMX3A6NHT5 357 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 CCSO14618 274 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 GOSR2O14653 212 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 SYNGR2O43760 224 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 SOX15O60248 233 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 OR13C7P0DN81 318 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 MYOD1P15172 320 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 AREGP15514 252 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 HTR2BP41595 481 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 HOXA1P49639 335 aaPredicted RBP8.13□□□□□ -1.11
CCDC47-203ENST00000580986 H2BFSP57053 126 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 TAS2R30P59541 319 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 C2orf68Q2NKX9 166 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 CXorf66Q5JRM2 361 aaPredicted RBP8.13□□□□□ -1.11
CCDC47-203ENST00000580986 FAM209BQ5JX69 171 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 OR10W1Q8NGF6 305 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 DTD1Q8TEA8 209 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 RAB40CQ96S21 281 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 ATP6V0BQ99437 205 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 HIPK2Q9H2X6 1198 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 ENY2Q9NPA8 101 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 MGAT4CQ9UBM8 478 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 F11RQ9Y624 299 aaKnown RBP8.13□□□□□ -1.11
CCDC47-203ENST00000580986 WSB1Q9Y6I7 421 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 U3KQ87 197 aa8.13□□□□□ -1.11
CCDC47-203ENST00000580986 IGLV11-55A0A075B6I3 123 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 C13orf42A0A1B0GVH6 325 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 CEBPZOSA8MTT3 80 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 CORTO00230 105 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 SCAF4O95104 1147 aaKnown RBP8.12□□□□□ -1.11
CCDC47-203ENST00000580986 OPN1MWP04001 364 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 OPN1MW2P0DN77 364 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 OPN1MW3P0DN78 364 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 SUB1P53999 127 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC47-203ENST00000580986 CD83Q01151 205 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 FAM223AQ8IWN6 122 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 NECAP1Q8NC96 275 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 OR5AU1Q8NGC0 362 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 OR11H7Q8NGC8 314 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 CHAC2Q8WUX2 184 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 TAF15Q92804 592 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC47-203ENST00000580986 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 RBKSQ9H477 322 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 THYN1Q9P016 225 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
CCDC47-203ENST00000580986 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 FAM25EA8MYX2 175 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 WRBO00258 174 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 TSC22D2O75157 780 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 GIPP09681 153 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 PET100P0DJ07 73 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 RNASE2P10153 161 aaKnown RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 CXCL3P19876 107 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 SNCAP37840 140 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 RAB9AP51151 201 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 FCN2Q15485 313 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 TMEM65Q6PI78 240 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 ZNF329Q86UD4 541 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 SLC24A4Q8NFF2 622 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 RNASEH2CQ8TDP1 164 aaKnown RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 SMIM8Q96KF7 97 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 UBE2E2Q96LR5 201 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 FANCD2OSQ96PS1 177 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 P2RX4Q99571 388 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 CITED1Q99966 193 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 ZNF747Q9BV97 191 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 HINT2Q9BX68 163 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 HEYLQ9NQ87 328 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 GSKIPQ9P0R6 139 aa8.11□□□□□ -1.11
CCDC47-203ENST00000580986 RCL1Q9Y2P8 373 aaKnown RBP8.11□□□□□ -1.11
CCDC47-203ENST00000580986 K7EPK0 472 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 DEFA4P12838 97 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 PVALBP20472 110 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-203ENST00000580986 NPY1RP25929 384 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 CDX1P47902 265 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-203ENST00000580986 RAP2BP61225 183 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 POLR2GP62487 172 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC47-203ENST00000580986 RUNX1Q01196 453 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
CCDC47-203ENST00000580986 KIAA0141Q14154 515 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-203ENST00000580986 TCTEX1D4Q5JR98 221 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 OR5T1Q8NG75 326 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 VN1R17PQ8TDU5 208 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 CXorf58Q96LI9 332 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 ZNF436Q9C0F3 470 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-203ENST00000580986 C11orf1Q9H5F2 150 aa8.1□□□□□ -1.11
CCDC47-203ENST00000580986 TSSC4Q9Y5U2 329 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms