RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PRRT1Q99946 306 aa11.26□□□□□ -0.61
SS18-212ENST00000579061 THAP7Q9BT49 309 aaPredicted RBP11.26□□□□□ -0.61
SS18-212ENST00000579061 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
SS18-212ENST00000579061 C14orf166Q9Y224 244 aaKnown RBP11.26□□□□□ -0.61
SS18-212ENST00000579061 FABP12A6NFH5 140 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 ZNF701M0R085 212 aaPredicted RBP11.25□□□□□ -0.61
SS18-212ENST00000579061 FOLR2P14207 255 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 AKR1C2P52895 323 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 MFAP2P55001 183 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 FAAP20Q6NZ36 180 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 OR2C3Q8N628 320 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 RTBDNQ9BSG5 229 aaPredicted RBP11.25□□□□□ -0.61
SS18-212ENST00000579061 RBM38Q9H0Z9 239 aaKnown RBP11.25□□□□□ -0.61
SS18-212ENST00000579061 SLC2A8Q9NY64 477 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
SS18-212ENST00000579061 CCDC160A6NGH7 325 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 TGOLN2O43493 480 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 GPR183P32249 361 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
SS18-212ENST00000579061 TRIM16LQ309B1 348 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 SPSB3Q6PJ21 355 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 SGPP2Q8IWX5 399 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 BSCL2Q96G97 398 aaPredicted RBP11.24□□□□□ -0.61
SS18-212ENST00000579061 ZNF436Q9C0F3 470 aaPredicted RBP11.24□□□□□ -0.61
SS18-212ENST00000579061 TMEM222Q9H0R3 208 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 SCP2D1Q9UJQ7 156 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 U3KQK5 164 aa11.24□□□□□ -0.61
SS18-212ENST00000579061 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 K7EIM0 57 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 CDS2O95674 445 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 CBLN1P23435 193 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 ERHP84090 104 aaKnown RBP11.23□□□□□ -0.61
SS18-212ENST00000579061 DHODHQ02127 395 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 SP6Q3SY56 376 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
SS18-212ENST00000579061 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 FAM219AQ8IW50 185 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 OR51S1Q8NGJ8 323 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 SCARB1Q8WTV0 552 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 MARC2Q969Z3 335 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 RRNAD1Q96FB5 475 aaKnown RBP11.23□□□□□ -0.61
SS18-212ENST00000579061 WWC2-AS2Q96NR7 200 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 SCGB3A2Q96PL1 93 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 ASCL2Q99929 193 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 NAA60Q9H7X0 242 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 PLEKHA3Q9HB20 300 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 ZC4H2Q9NQZ6 224 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 C19orf73Q9NVV2 129 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
SS18-212ENST00000579061 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
SS18-212ENST00000579061 A0A0B4J293 547 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 TEX13DA0A0J9YY54 714 aaPredicted RBP11.22□□□□□ -0.61
SS18-212ENST00000579061 ZNF320A2RRD8 509 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 TMEM213A2RRL7 107 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 CRYM-AS1A6NIL9 109 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 IGHV4-30-4P0DP06 118 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 FCGR2BP31994 310 aaPredicted RBP11.22□□□□□ -0.61
SS18-212ENST00000579061 S100A5P33763 92 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 GLYATL2Q8WU03 294 aa11.22□□□□□ -0.61
SS18-212ENST00000579061 ZNF785A8K8V0 405 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 F8W735 103 aaPredicted RBP11.21□□□□□ -0.61
SS18-212ENST00000579061 OR5AC1P0C628 307 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 C8orf88P0DMB2 117 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 SBSPONQ8IVN8 264 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 DEDD2Q8WXF8 326 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 RBPMSQ93062 196 aaKnown RBP11.21□□□□□ -0.61
SS18-212ENST00000579061 TXN2Q99757 166 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 PDCD10Q9BUL8 212 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.61
SS18-212ENST00000579061 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.61
SS18-212ENST00000579061 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 I3L2K1 104 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 NDUFA4O00483 81 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 IFNA17P01571 189 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 EDN2P20800 178 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 FAUP35544 74 aaKnown RBP11.2□□□□□ -0.62
SS18-212ENST00000579061 AP3S2P59780 193 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 UNQ9165/PRO28630Q6UXU0 137 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 CCDC190Q86UF4 302 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 UXS1Q8NBZ7 420 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
SS18-212ENST00000579061 TMEM190Q8WZ59 177 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 GALNT14Q96FL9 552 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 V9GYH0 126 aa11.2□□□□□ -0.62
SS18-212ENST00000579061 HUWE1Q7Z6Z7 4374 aaKnown RBP11.2□□□□□ -0.62
SS18-212ENST00000579061 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms