RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ARPC5LQ9BPX5 153 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 C11orf1Q9H5F2 150 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 TPSG1Q9NRR2 321 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 VPREB3Q9UKI3 123 aa11.07□□□□□ -0.64
CSNK1D-209ENST00000578904 BORCS7-ASMTA0A0B4J1R7 106 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 FAM24AA6NFZ4 105 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 DFFBO76075 338 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 NPY1RP25929 384 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 VDAC2P45880 294 aaPredicted RBP11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 PAX9P55771 341 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 UBA52P62987 128 aaKnown RBP11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 OR10P1Q8NGE3 313 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 OR1S2Q8NGQ3 325 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 PIFOQ8TCI5 191 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 MDFIQ99750 246 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 CUBNO60494 3623 aa11.06□□□□□ -0.64
CSNK1D-209ENST00000578904 RNF222A6NCQ9 220 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 H3BP45 60 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 CLDN34H7C241 214 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 TRIM77I1YAP6 450 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 CORTO00230 105 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 IFNA4P05014 189 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 CXCL2P19875 107 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 CX3CL1P78423 397 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 ZNF266Q14584 549 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 OPCMLQ14982 345 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 ATP6V1FQ16864 119 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 TMEM219Q86XT9 240 aa11.05□□□□□ -0.64
CSNK1D-209ENST00000578904 MSGN1A6NI15 193 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 FCN1O00602 326 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 BCL2L11O43521 198 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 METTL15P1P0C7V9 234 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 OR13C7P0DN81 318 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 SRSF2Q01130 221 aaKnown RBP11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 MRGPRG-AS1Q2M3A8 158 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 FBLN7Q53RD9 439 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 C2orf83Q53S99 150 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 SLC51BQ86UW2 128 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 LILRB2Q8N423 598 aa11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
CSNK1D-209ENST00000578904 IGSF23A1L1A6 192 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 JTBO76095 146 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 CST7O76096 145 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 TMEM50AO95807 157 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 IFNA5P01569 189 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 DEFA4P12838 97 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 MYOD1P15172 320 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 SLC25A24Q6NUK1 477 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 PRIMA1Q86XR5 153 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 STPG2Q8N412 459 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 ZNF114Q8NC26 417 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 RNASEH2CQ8TDP1 164 aaKnown RBP11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 GGACTQ9BVM4 153 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 GON7Q9BXV9 100 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 NPFFR1Q9GZQ6 430 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 JMJD1CQ15652 2540 aa11.03□□□□□ -0.64
CSNK1D-209ENST00000578904 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 RPS10-NUDT3A0A1W2PQS6 291 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 NHLH2Q02577 135 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 C9orf152Q5JTZ5 239 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 C10orf55Q5SWW7 151 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 LAMTOR1Q6IAA8 161 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 OR8G2PQ6IF36 304 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 EIF5AL1Q6IS14 154 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 OR5C1Q8NGR4 320 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 OR1P1Q8NH06 330 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 PRSS22Q9GZN4 317 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 PARP11Q9NR21 331 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 THYN1Q9P016 225 aa11.02□□□□□ -0.65
CSNK1D-209ENST00000578904 C15orf62A8K5M9 175 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 NPIPB5A8MRT5 1133 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 CRYBA1P05813 215 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 TPT1P13693 172 aaKnown RBP11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 SLC38A11Q08AI6 406 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 EXOSC2Q13868 293 aaKnown RBP11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 AKIRIN2Q53H80 203 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 ARSJQ5FYB0 599 aaPredicted RBP11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 SLC35E3Q7Z769 313 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 SCGB1C1Q8TD33 95 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 CACNG8Q8WXS5 425 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms