RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
CRLF3-203ENST00000578692 H2BFWTQ7Z2G1 175 aa11.89□□□□□ -0.51
CRLF3-203ENST00000578692 GAR1Q9NY12 217 aaKnown RBP11.89□□□□□ -0.51
CRLF3-203ENST00000578692 C21orf62Q9NYP8 219 aa11.89□□□□□ -0.51
CRLF3-203ENST00000578692 K7EIM0 57 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 M0QYG6 137 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 NDUFA4O00483 81 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 OR4A16Q8NH70 328 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 TMEM190Q8WZ59 177 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 NAA50Q9GZZ1 169 aaKnown RBP11.88□□□□□ -0.51
CRLF3-203ENST00000578692 C5orf66Q9H5L9 145 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 KLK11Q9UBX7 282 aa11.88□□□□□ -0.51
CRLF3-203ENST00000578692 LCE6AA0A183 80 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 F8W735 103 aaPredicted RBP11.87□□□□□ -0.51
CRLF3-203ENST00000578692 ZNF182P17025 639 aaPredicted RBP11.87□□□□□ -0.51
CRLF3-203ENST00000578692 CTF1Q16619 201 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 Q56UQ5 140 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 RNASE12Q5GAN4 147 aaKnown RBP11.87□□□□□ -0.51
CRLF3-203ENST00000578692 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 IL17DQ8TAD2 202 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 AP3S1Q92572 193 aa11.87□□□□□ -0.51
CRLF3-203ENST00000578692 DAZ1Q9NQZ3 744 aaKnown RBP11.87□□□□□ -0.51
CRLF3-203ENST00000578692 LOC102724200A0A096LPH7 203 aaPredicted RBP11.86□□□□□ -0.51
CRLF3-203ENST00000578692 K7EMT4 169 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 GABARAPO95166 117 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 ADMP35318 185 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 SPAG8Q99932 426 aaPredicted RBP11.86□□□□□ -0.51
CRLF3-203ENST00000578692 C20orf24Q9BUV8 137 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
CRLF3-203ENST00000578692 DYNC2H1Q8NCM8 4307 aaKnown RBP11.85□□□□□ -0.51
CRLF3-203ENST00000578692 TSPAN4O14817 238 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 CD3DP04234 171 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 CTSGP08311 255 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 PGAM2P15259 253 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 RND3P61587 244 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 HSPE1P61604 102 aaKnown RBP11.85□□□□□ -0.51
CRLF3-203ENST00000578692 RNASE10Q5GAN6 216 aaKnown RBP11.85□□□□□ -0.51
CRLF3-203ENST00000578692 GPR107Q5VW38 600 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 LHFPL1Q86WI0 220 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 OR52I2Q8NH67 350 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 ZNF486Q96H40 463 aaPredicted RBP11.85□□□□□ -0.51
CRLF3-203ENST00000578692 GGTLC1Q9BX51 225 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 MTFP1Q9UDX5 166 aa11.85□□□□□ -0.51
CRLF3-203ENST00000578692 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 I3L2K1 104 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 SMIM18P0DKX4 95 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 PI3P19957 117 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 MFAP4P55083 255 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 ERHP84090 104 aaKnown RBP11.84□□□□□ -0.51
CRLF3-203ENST00000578692 PRCDQ00LT1 54 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 C15orf40Q8WUR7 153 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 ABHD1Q96SE0 405 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 CSMD3Q7Z407 3707 aa11.84□□□□□ -0.51
CRLF3-203ENST00000578692 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 NUPL2O15504 423 aaKnown RBP11.83□□□□□ -0.52
CRLF3-203ENST00000578692 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
CRLF3-203ENST00000578692 PIGPP57054 158 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 RELQ04864 619 aaPredicted RBP11.83□□□□□ -0.52
CRLF3-203ENST00000578692 ZNF114Q8NC26 417 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 TXN2Q99757 166 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 UBQLN2Q9UHD9 624 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
CRLF3-203ENST00000578692 MT-CO2P00403 227 aa11.82□□□□□ -0.52
CRLF3-203ENST00000578692 TBPP20226 339 aa11.82□□□□□ -0.52
CRLF3-203ENST00000578692 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-203ENST00000578692 IZUMO4Q1ZYL8 232 aa11.82□□□□□ -0.52
CRLF3-203ENST00000578692 TERB2Q8NHR7 220 aa11.82□□□□□ -0.52
CRLF3-203ENST00000578692 TP53RKQ96S44 253 aa11.82□□□□□ -0.52
CRLF3-203ENST00000578692 SMPXQ9UHP9 88 aa11.82□□□□□ -0.52
CRLF3-203ENST00000578692 C3orf85A0A1B0GTC6 90 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 YIF1AO95070 293 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 IGKV1-5P01602 117 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 TMEM229BQ8NBD8 167 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 OR4D10Q8NGI6 311 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 ZFAND1Q8TCF1 268 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 PINX1Q96BK5 328 aaKnown RBP11.81□□□□□ -0.52
CRLF3-203ENST00000578692 ZNF414Q96IQ9 312 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 SACSQ9NZJ4 4579 aa11.81□□□□□ -0.52
CRLF3-203ENST00000578692 OR4C46A6NHA9 309 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 RGS5O15539 181 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 GNG7O60262 68 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 ATG12O94817 140 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 CD74P04233 296 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
CRLF3-203ENST00000578692 SNCAP37840 140 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 AKR1C2P52895 323 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 PPP5CP53041 499 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 TAS2R19P59542 299 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms