RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SLC17A2O00624 439 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 APOHP02749 345 aaPredicted RBP9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 TRAPPC2P0DI81 140 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 TRAPPC2BP0DI82 140 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 NFYAP23511 347 aaPredicted RBP9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 EIF4EBP1Q13541 118 aaPredicted RBP9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 RAB11BQ15907 218 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 HSD17B12Q53GQ0 312 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 THOC7Q6I9Y2 204 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 HSD17B13Q7Z5P4 300 aaPredicted RBP9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 FRZBQ92765 325 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 GPHA2Q96T91 129 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-206ENST00000577779 IGKV1D-8A0A087WSZ0 117 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 IGKV1D-13A0A0B4J2D9 117 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 TMEM189A5PLL7 270 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 EFCAB10A6NFE3 127 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 DENRO43583 198 aaKnown RBP9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 ZNF688P0C7X2 276 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 IGKV1-13P0DP09 117 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 GNB3P16520 340 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 LORP23490 312 aaPredicted RBP9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 TALDO1P37837 337 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 CLDN12P56749 244 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 ZNF773Q6PK81 442 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 Q6ZS49 121 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 LYPD1Q8N2G4 141 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 STXBP6Q8NFX7 210 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 PYDC1Q8WXC3 89 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 GRAMD2BQ96HH9 432 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
PPP4R1-206ENST00000577779 MYL12BO14950 172 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 WNT4P56705 351 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 ST3GAL4Q11206 333 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 MS4A15Q8N5U1 240 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 NIPSNAP3BQ9BS92 247 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 HINT2Q9BX68 163 aa9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 NXF2Q9GZY0 626 aaKnown RBP9.97□□□□□ -0.81
PPP4R1-206ENST00000577779 TEX50A0A1B0GTY4 177 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 TEX48A0A1B0GUV7 120 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 K7EQG2 157 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 TAS2R31P59538 309 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 C2orf76Q3KRA6 126 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 SPAG16Q8N0X2 631 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 C15orf53Q8NAA6 179 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 FAM3DQ96BQ1 224 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 GFI1Q99684 422 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 TMEM140Q9NV12 185 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 DKK2Q9UBU2 259 aa9.96□□□□□ -0.82
PPP4R1-206ENST00000577779 ERICH4A6NGS2 130 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 MFNGO00587 321 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 TNFSF12O43508 249 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 FGF2P09038 288 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 CTXN2P0C2S0 81 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 NQO2P16083 231 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 GADD45AP24522 165 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 MFAP4P55083 255 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 RCN1Q15293 331 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 FAM222AQ5U5X8 452 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 TOMM20LQ6UXN7 152 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 DMBX1Q8NFW5 382 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 OR1L8Q8NGR8 309 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 OR10R2Q8NGX6 335 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 LSM10Q969L4 123 aaKnown RBP9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 NEU1Q99519 415 aa9.95□□□□□ -0.82
PPP4R1-206ENST00000577779 TMEM272A0A1B0GTI8 110 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 UCHL1P09936 223 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 HIST1H1DP16402 221 aaKnown RBP9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 FGF9P31371 208 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 POU2AF1Q16633 256 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 ZNF555Q8NEP9 628 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 RAB40CQ96S21 281 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 TXN2Q99757 166 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 DCSTAMPQ9H295 470 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 RAB22AQ9UL26 194 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 AK6Q9Y3D8 172 aaKnown RBP9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 RFNGQ9Y644 331 aa9.94□□□□□ -0.82
PPP4R1-206ENST00000577779 SMIM9A6NGZ8 99 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 RBFOX2O43251 390 aaKnown RBP eCLIP9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 GNG7O60262 68 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 HPRT1P00492 218 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 XGP55808 180 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 OXA1LQ15070 435 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 ZNF705AQ6ZN79 300 aaPredicted RBP9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 MISP3Q96FF7 219 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 C9orf16Q9BUW7 83 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 NDUFA4L2Q9NRX3 87 aa9.93□□□□□ -0.82
PPP4R1-206ENST00000577779 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
PPP4R1-206ENST00000577779 ZNF705FA8MVS1 300 aaPredicted RBP9.92□□□□□ -0.82
PPP4R1-206ENST00000577779 SULT1C2O00338 296 aa9.92□□□□□ -0.82
PPP4R1-206ENST00000577779 IGHV3-48P01763 117 aa9.92□□□□□ -0.82
PPP4R1-206ENST00000577779 ZNF705DP0CH99 300 aaPredicted RBP9.92□□□□□ -0.82
PPP4R1-206ENST00000577779 ZNF705BP0CI00 300 aaPredicted RBP9.92□□□□□ -0.82
PPP4R1-206ENST00000577779 DTYMKP23919 212 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms