RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 THYN1Q9P016 225 aa14.79□□□□□ -0.04
SS18-208ENST00000577751 CYB5BO43169 146 aa14.78□□□□□ -0.04
SS18-208ENST00000577751 RPEL1Q2QD12 228 aa14.78□□□□□ -0.04
SS18-208ENST00000577751 Q6ZRM9 215 aa14.78□□□□□ -0.04
SS18-208ENST00000577751 OR2C3Q8N628 320 aa14.78□□□□□ -0.04
SS18-208ENST00000577751 EEF1AKMT3Q96AZ1 226 aa14.78□□□□□ -0.04
SS18-208ENST00000577751 PRKDCP78527 4128 aaKnown RBP14.77□□□□□ -0.04
SS18-208ENST00000577751 TRBV7-1A0A0A6YYK4 115 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 WI2-2373I1.2A0A1W2PRP0 233 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 MFSD2BA6NFX1 497 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 K7EIL1 84 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 ST8SIA3O43173 380 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 SAP30O75446 220 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 AKR1C4P17516 323 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 MECP2P51608 486 aaKnown RBP14.77□□□□□ -0.05
SS18-208ENST00000577751 SYNJ2BPP57105 145 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 AARDQ4LEZ3 155 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 TMEM268Q5VZI3 342 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 TRIQKQ629K1 86 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 LINC00299Q6ZSB3 139 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 OR9G4Q8NGQ1 327 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 OR1L6Q8NGR2 347 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 IL22RA2Q969J5 263 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 S4R3C0 116 aa14.77□□□□□ -0.05
SS18-208ENST00000577751 NAP1L6A6NFF2 107 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 PPP5D1E7EU14 171 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 INS-IGF2F8WCM5 200 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 GGCTO75223 188 aaKnown RBP14.76□□□□□ -0.05
SS18-208ENST00000577751 IGHV3-23P01764 117 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 IL7P13232 177 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 TATDN3Q17R31 274 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 TMEM128Q5BJH2 165 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 SLC25A24Q6NUK1 477 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 CLEC19AQ6UXS0 136 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 IL34Q6ZMJ4 242 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 ZNF114Q8NC26 417 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 OR1P1Q8NH06 330 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 ZNF502Q8TBZ5 544 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 MRAPQ8TCY5 172 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 VN1R17PQ8TDU5 208 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 ELOVL1Q9BW60 279 aa14.76□□□□□ -0.05
SS18-208ENST00000577751 INPP1P49441 399 aa14.75□□□□□ -0.05
SS18-208ENST00000577751 CNPY1Q3B7I2 92 aa14.75□□□□□ -0.05
SS18-208ENST00000577751 RNASE11Q8TAA1 199 aaKnown RBP14.75□□□□□ -0.05
SS18-208ENST00000577751 GPR146Q96CH1 333 aa14.75□□□□□ -0.05
SS18-208ENST00000577751 OR4C12Q96R67 309 aa14.75□□□□□ -0.05
SS18-208ENST00000577751 PLEKHA3Q9HB20 300 aa14.75□□□□□ -0.05
SS18-208ENST00000577751 PRR13Q9NZ81 148 aa14.75□□□□□ -0.05
SS18-208ENST00000577751 CLEC3BP05452 202 aa14.74□□□□□ -0.05
SS18-208ENST00000577751 ERHP84090 104 aaKnown RBP14.74□□□□□ -0.05
SS18-208ENST00000577751 RBMS2Q15434 407 aaKnown RBP14.74□□□□□ -0.05
SS18-208ENST00000577751 TMED4Q7Z7H5 227 aa14.74□□□□□ -0.05
SS18-208ENST00000577751 SLC35G3Q8N808 338 aa14.74□□□□□ -0.05
SS18-208ENST00000577751 OR52E5Q8NH55 327 aa14.74□□□□□ -0.05
SS18-208ENST00000577751 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.74□□□□□ -0.05
SS18-208ENST00000577751 SIGLEC8Q9NYZ4 499 aa14.74□□□□□ -0.05
SS18-208ENST00000577751 K7EIM0 57 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 IFNA17P01571 189 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 HLA-AP01891 365 aaKnown RBP14.73□□□□□ -0.05
SS18-208ENST00000577751 ANXA3P12429 323 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 ARL3P36405 182 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 CCR6P51684 374 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 SPINK9Q5DT21 86 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 GPHB5Q86YW7 130 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 SCARB1Q8WTV0 552 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 ATP6V0BQ99437 205 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 C7orf50Q9BRJ6 194 aaKnown RBP14.73□□□□□ -0.05
SS18-208ENST00000577751 PDCD10Q9BUL8 212 aa14.73□□□□□ -0.05
SS18-208ENST00000577751 A0A0B4J2A0 478 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 LGALS9O00182 355 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 NDUFB6O95139 128 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 OR2C1O95371 312 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 IGLV1-51P01701 117 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 CSN3P07498 182 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 BTCP35070 178 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 SPCS3P61009 180 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 SRPXP78539 464 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 PVRIGQ6DKI7 326 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 LGI3Q8N145 548 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 PEMTQ9UBM1 199 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 CACNG5Q9UF02 275 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 SHPKQ9UHJ6 478 aa14.72□□□□□ -0.05
SS18-208ENST00000577751 ZNF256Q9Y2P7 627 aaPredicted RBP14.72□□□□□ -0.05
SS18-208ENST00000577751 F8W735 103 aaPredicted RBP14.71□□□□□ -0.05
SS18-208ENST00000577751 I3L2K1 104 aa14.71□□□□□ -0.05
SS18-208ENST00000577751 NMSQ5H8A3 153 aa14.71□□□□□ -0.05
SS18-208ENST00000577751 LYZL2Q7Z4W2 148 aa14.71□□□□□ -0.05
SS18-208ENST00000577751 CENPSQ8N2Z9 138 aa14.71□□□□□ -0.05
SS18-208ENST00000577751 LRTM2Q8N967 370 aa14.71□□□□□ -0.05
SS18-208ENST00000577751 SORL1Q92673 2214 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 PIGBOS1A0A0B4J2F0 54 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 LINC00854A0A1B0GVQ3 168 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 CENPXA8MT69 81 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 PLA2G10O15496 165 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 SPNP16150 400 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 GPR183P32249 361 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 UBE2MP61081 183 aaKnown RBP14.7□□□□□ -0.06
SS18-208ENST00000577751 PRR25Q96S07 402 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 BATF3Q9NR55 127 aa14.7□□□□□ -0.06
SS18-208ENST00000577751 C21orf62Q9NYP8 219 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms