RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LINC00322Q6ZN03 302 aaPredicted RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 Q6ZS49 121 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 KCTD9Q7L273 389 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 GTSCR1Q86UQ5 136 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 Q8N402 240 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 TTC9CQ8N5M4 171 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 ZNF680Q8NEM1 530 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 OSR1Q8TAX0 266 aaPredicted RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 CACNG8Q8WXS5 425 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 SNAPC3Q92966 411 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 ADTRPQ96IZ2 230 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 NEURL2Q9BR09 285 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 HIPK2Q9H2X6 1198 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 FAM212BQ9NTI7 297 aaPredicted RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 NDUFB11Q9NX14 153 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 RBMX2Q9Y388 322 aaKnown RBP4.68□□□□□ -1.66
NUP88-212ENST00000576708 OR2W1Q9Y3N9 320 aa4.68□□□□□ -1.66
NUP88-212ENST00000576708 METTL21EPA6NDL7 271 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 TMEM235A6NFC5 223 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 C2orf70A6NJV1 201 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 CGB1A6NKQ9 187 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 FAM223BA6NKX1 122 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 PRYO14603 147 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 TNFSF12O43508 249 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 OR2A4O95047 310 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 REG1AP05451 166 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 FOLR2P14207 255 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 AREGP15514 252 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 DTYMKP23919 212 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 PSMB9P28065 219 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 RPL27AP46776 148 aaKnown RBP4.67□□□□□ -1.66
NUP88-212ENST00000576708 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
NUP88-212ENST00000576708 EIF4EBP1Q13541 118 aaPredicted RBP4.67□□□□□ -1.66
NUP88-212ENST00000576708 GUCA2BQ16661 112 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 DEFB114Q30KQ6 69 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 C15orf32Q32M92 178 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 SAPCD1Q5SSQ6 148 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 HACD4Q5VWC8 232 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 CLEC19AQ6UXS0 136 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 SSX9Q7RTT3 188 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 FAM223AQ8IWN6 122 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 MMD2Q8IY49 270 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 ZNF645Q8N7E2 425 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 NECAP1Q8NC96 275 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 OR5H6Q8NGV6 325 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 DYNLRB2Q8TF09 96 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 TCTEX1D2Q8WW35 142 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 SPIN2AQ99865 258 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 SPIN2BQ9BPZ2 258 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 QTRT1Q9BXR0 403 aaKnown RBP4.67□□□□□ -1.66
NUP88-212ENST00000576708 OR51E2Q9H255 320 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 RNF167Q9H6Y7 350 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 SRD5A3Q9H8P0 318 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 ZC4H2Q9NQZ6 224 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 CCL28Q9NRJ3 127 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 TXNL4BQ9NX01 149 aaKnown RBP4.67□□□□□ -1.66
NUP88-212ENST00000576708 TAS2R8Q9NYW2 309 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 SIGLEC8Q9NYZ4 499 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 DAPK2Q9UIK4 370 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 PAIP2BQ9ULR5 123 aaKnown RBP4.67□□□□□ -1.66
NUP88-212ENST00000576708 SPATA2Q9UM82 520 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 CEPT1Q9Y6K0 416 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 ALMS1Q8TCU4 4167 aa4.67□□□□□ -1.66
NUP88-212ENST00000576708 TRAV3A0A0B4J244 114 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 IGHV3-35A0A0C4DH35 117 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 DPPA5A6NC42 116 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 OR11H12B2RN74 326 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 F8WDY8 70 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 GGCTO75223 188 aaKnown RBP4.66□□□□□ -1.66
NUP88-212ENST00000576708 KBTBD11O94819 623 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 IFNA6P05013 189 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 RPA2P15927 270 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 KIR2DS2P43631 304 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 GNG2P59768 71 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 MXD1Q05195 221 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 CNIH2Q6PI25 160 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 PUSL1Q8N0Z8 303 aaKnown RBP4.66□□□□□ -1.66
NUP88-212ENST00000576708 GVQW1Q8N7I0 195 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 OR2K2Q8NGT1 345 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 TMEM167AQ8TBQ9 72 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 LGALS14Q8TCE9 139 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 SECTM1Q8WVN6 248 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 OR2A7Q96R45 310 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 TPPP3Q9BW30 176 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 MLXQ9UH92 298 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 ANXA10Q9UJ72 324 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 PRELID3BQ9Y3B1 194 aa4.66□□□□□ -1.66
NUP88-212ENST00000576708 STRAPQ9Y3F4 350 aaKnown RBP4.66□□□□□ -1.66
NUP88-212ENST00000576708 TRAV18A0A075B6X5 111 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 TMEM213A2RRL7 107 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 MEIS3P1A6NDR6 274 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 NPIPB5A8MRT5 1133 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 SULT1C2O00338 296 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 AIREO43918 545 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 CTXN2P0C2S0 81 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 CD36P16671 472 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 CBLN1P23435 193 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 PSMB6P28072 239 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 FGF9P31371 208 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms