RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TMEM140Q9NV12 185 aa7.22□□□□□ -1.25
CALCOCO2-227ENST00000575560 IGKV3-7A0A075B6H7 116 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 IGHV3-49A0A0A0MS15 119 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 TRAV14DV4A0A0A6YYC5 116 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 TMEM235A6NFC5 223 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 ZNF705EA8MWA4 302 aaPredicted RBP7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 DFFBO76075 338 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 MIFP14174 115 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 RAB3BP20337 219 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 FCGR2CP31995 323 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 PAFAH1B2P68402 229 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 RELQ04864 619 aaPredicted RBP7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 LGALS9BQ3B8N2 356 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 Q56UQ5 140 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 OGFRL1Q5TC84 451 aaPredicted RBP7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 CADM3Q8N126 398 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 LILRB2Q8N423 598 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 DMBX1Q8NFW5 382 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 OR1L8Q8NGR8 309 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 OR13F1Q8NGS4 319 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 CMTM3Q96MX0 182 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 NXF2Q9GZY0 626 aaKnown RBP7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 PGPEP1Q9NXJ5 209 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 X6R8D5 127 aa7.21□□□□□ -1.26
CALCOCO2-227ENST00000575560 IGHV3OR16-13A0A075B7E8 117 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 IGHV3-74A0A0B4J1X5 117 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 M0R2N4 97 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 CASQ2O14958 399 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 NUPL2O15504 423 aaKnown RBP7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 PPYP01298 95 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 AMBPP02760 352 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 CD5P06127 495 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 P0DMU3 169 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 FAM231AP0DMU4 169 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 FAM231CP0DMU5 169 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 PTHLHP12272 177 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 GNG2P59768 71 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 DEFB131AP59861 70 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 CATR1Q13166 79 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 LEMD1Q68G75 181 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 TCF24Q7RTU0 167 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 FAM24BQ8N5W8 94 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 LSM10Q969L4 123 aaKnown RBP7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 TXN2Q99757 166 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 MS4A6AQ9H2W1 248 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 VSIRQ9H7M9 311 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 TPRKBQ9Y3C4 175 aa7.2□□□□□ -1.26
CALCOCO2-227ENST00000575560 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 MARCH11A6NNE9 402 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 I3L2K1 104 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 RGS10O43665 173 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 YIF1AO95070 293 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 APOHP02749 345 aaPredicted RBP7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 MFAP4P55083 255 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 RCN1Q15293 331 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 TMEM41BQ5BJD5 291 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 ZNF818PQ6ZRF7 136 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 TRPT1Q86TN4 253 aaKnown RBP7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 STHQ8IWL8 128 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 CSNK1G2-AS1Q8NCQ2 148 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 DUSP18Q8NEJ0 188 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 OR1P1Q8NH06 330 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 GIMAP1Q8WWP7 306 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 SLC5A7Q9GZV3 580 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 COMMD9Q9P000 198 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 OR51B2Q9Y5P1 312 aa7.19□□□□□ -1.26
CALCOCO2-227ENST00000575560 DEFB131BA0A096LNP1 70 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 TRDV1A0A1B0GX56 115 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 SCGNO76038 276 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 MYL9P24844 172 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 GNRHRP30968 328 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 C12orf74Q32Q52 190 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 MORN3Q6PF18 240 aaPredicted RBP7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 TOMM20LQ6UXN7 152 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 Q6ZR54 194 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 PRSS48Q7RTY5 328 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 HOGA1Q86XE5 327 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 BEST4Q8NFU0 473 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 OR51H1Q8NH63 302 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 ST8SIA2Q92186 375 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 SLC25A46Q96AG3 418 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 HINT2Q9BX68 163 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 CCDC90BQ9GZT6 254 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 CELA1Q9UNI1 258 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 NSG2Q9Y328 171 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 HERC1Q15751 4861 aa7.18□□□□□ -1.26
CALCOCO2-227ENST00000575560 DBX1A6NMT0 343 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 ST8SIA3O43173 380 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 KRASP01116 189 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 SPP1P10451 314 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 C4BPBP20851 252 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 F2RP25116 425 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 ARPC4P59998 168 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 AADACL3Q5VUY0 350 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 ZNF575Q86XF7 245 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 CENPSQ8N2Z9 138 aa7.17□□□□□ -1.26
CALCOCO2-227ENST00000575560 TMEM56Q96MV1 263 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms