RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 RAB1BQ9H0U4 201 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 CBLN4Q9NTU7 201 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 CTXND1A0A1B0GTU2 59 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 FLYWCH2Q96CP2 140 aaKnown RBP8.51□□□□□ -1.05
USP43-205ENST00000574408 NABP2Q9BQ15 211 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 BET1LQ9NYM9 111 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 IL6RP08887 468 aaPredicted RBP8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 CDX1P47902 265 aaPredicted RBP8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
USP43-205ENST00000574408 TREML4Q6UXN2 200 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 C11orf42Q8N5U0 333 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 ACTR3CQ9C0K3 210 aaPredicted RBP8.5□□□□□ -1.05
USP43-205ENST00000574408 TMEM133Q9H2Q1 129 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 TRAV34A0A0B4J273 112 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 XKRY2A2RUG3 117 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 PRCDQ00LT1 54 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 GCSAMLQ5JQS6 135 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 ZNF841Q6ZN19 808 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 C8orf31Q8N9H6 132 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 RAB24Q969Q5 203 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 C14orf144Q96I85 54 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 SMIM7Q9BQ49 75 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 IFNA1P01562 189 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 AGAP20933 346 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 Q8N7P7 452 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 ZNF596Q8TC21 504 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 ST6GALNAC6Q969X2 333 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 ZNF257Q9Y2Q1 563 aa8.5□□□□□ -1.05
USP43-205ENST00000574408 TEX50A0A1B0GTY4 177 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 FAM3BP58499 235 aaPredicted RBP8.49□□□□□ -1.05
USP43-205ENST00000574408 RAB4BP61018 213 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 ACOT6Q3I5F7 207 aaPredicted RBP8.49□□□□□ -1.05
USP43-205ENST00000574408 OR4C13Q8NGP0 309 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 FAM103A1Q9BTL3 118 aaKnown RBP8.49□□□□□ -1.05
USP43-205ENST00000574408 FUT9Q9Y231 359 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 DMRT1Q9Y5R6 373 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 LRBAP50851 2863 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 ACACBO00763 2458 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 IGHV3-72A0A0B4J1Y9 119 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 PLXNB1O43157 2135 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 MPDU1O75352 247 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 IL3RAP26951 378 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 UQCRFS1P47985 274 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 ARSJQ5FYB0 599 aaPredicted RBP8.49□□□□□ -1.05
USP43-205ENST00000574408 FAM71F2Q6NXP2 309 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 PDPNQ86YL7 162 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 OR8B3Q8NGG8 313 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 OR8B2Q96RD0 313 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 MGST2Q99735 147 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 COMMD5Q9GZQ3 224 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 FKBP11Q9NYL4 201 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 WASHC3Q9Y3C0 194 aa8.49□□□□□ -1.05
USP43-205ENST00000574408 PPIAL4CA0A0B4J2A2 164 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 SEC14L6B5MCN3 397 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 PPP5D1E7EU14 171 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 GATCO43716 136 aaKnown RBP8.48□□□□□ -1.05
USP43-205ENST00000574408 PPIAL4GP0DN37 164 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 COX7A1P24310 79 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 CDC34P49427 236 aaPredicted RBP8.48□□□□□ -1.05
USP43-205ENST00000574408 RPL8P62917 257 aaKnown RBP8.48□□□□□ -1.05
USP43-205ENST00000574408 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 OR4F5Q8NH21 305 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 OR5B3Q8NH48 314 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 OR4F4Q96R69 305 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 IGHV2-26A0A0B4J1V2 119 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 ZNF137PP52743 207 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 OR10W1Q8NGF6 305 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 SSMEM1Q8WWF3 244 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 TIMD4Q96H15 378 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 NPVFQ9HCQ7 196 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 PXMP4Q9Y6I8 212 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 ARHGAP32A7KAX9 2087 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 NAV3Q8IVL0 2385 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 H7BYZ3 331 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 ENSAO43768 121 aaKnown RBP8.48□□□□□ -1.05
USP43-205ENST00000574408 HOXA5P20719 270 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 RAB1CQ92928 201 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 NEIL1Q96FI4 390 aaPredicted RBP8.48□□□□□ -1.05
USP43-205ENST00000574408 ELOVL1Q9BW60 279 aa8.48□□□□□ -1.05
USP43-205ENST00000574408 A6NNC1 897 aa8.47□□□□□ -1.05
USP43-205ENST00000574408 FSTL3O95633 263 aa8.47□□□□□ -1.05
USP43-205ENST00000574408 SSTP61278 116 aa8.47□□□□□ -1.05
USP43-205ENST00000574408 C11orf71Q6IPW1 123 aa8.47□□□□□ -1.05
USP43-205ENST00000574408 A0A1B0GUS0 222 aa8.47□□□□□ -1.05
USP43-205ENST00000574408 USF1P22415 310 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms