RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ARPC4P59998 168 aa8.66□□□□□ -1.02
CTNS-208ENST00000574218 EIF4EBP1Q13541 118 aaPredicted RBP8.66□□□□□ -1.02
CTNS-208ENST00000574218 RBMY1FQ15415 496 aaKnown RBP8.66□□□□□ -1.02
CTNS-208ENST00000574218 MORN3Q6PF18 240 aaPredicted RBP8.66□□□□□ -1.02
CTNS-208ENST00000574218 OR1L8Q8NGR8 309 aa8.66□□□□□ -1.02
CTNS-208ENST00000574218 GIMAP1Q8WWP7 306 aa8.66□□□□□ -1.02
CTNS-208ENST00000574218 LSM10Q969L4 123 aaKnown RBP8.66□□□□□ -1.02
CTNS-208ENST00000574218 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
CTNS-208ENST00000574218 TMEM140Q9NV12 185 aa8.66□□□□□ -1.02
CTNS-208ENST00000574218 LSM2Q9Y333 95 aaKnown RBP8.66□□□□□ -1.02
CTNS-208ENST00000574218 F11RQ9Y624 299 aaKnown RBP8.66□□□□□ -1.02
CTNS-208ENST00000574218 IGHV3OR16-13A0A075B7E8 117 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 IGHV3-74A0A0B4J1X5 117 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 SULT1C2O00338 296 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 FGF2P09038 288 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 GNAO1P09471 354 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 SPP1P10451 314 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 MYL9P24844 172 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 BRWD1-AS2P59051 145 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 CDNFQ49AH0 187 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 HACD4Q5VWC8 232 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 LAIR2Q6ISS4 152 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 ZBTB34Q8NCN2 500 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 DGCR14Q96DF8 476 aaKnown RBP8.65□□□□□ -1.02
CTNS-208ENST00000574218 TMEM231Q9H6L2 316 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 CCL28Q9NRJ3 127 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 RABAC1Q9UI14 185 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 ANXA10Q9UJ72 324 aa8.65□□□□□ -1.02
CTNS-208ENST00000574218 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 CASQ2O14958 399 aaPredicted RBP8.64□□□□□ -1.03
CTNS-208ENST00000574218 SNAPC5O75971 98 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 MFAP4P55083 255 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 WT1-ASQ06250 92 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 MSMO1Q15800 293 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 POU2AF1Q16633 256 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 FAM90A2PQ658T7 463 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 ZNF773Q6PK81 442 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 MAPKAPK5-AS1Q8N8E1 139 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 OR13F1Q8NGS4 319 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 NUDCD2Q8WVJ2 157 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 TMEM56Q96MV1 263 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 ACOT13Q9NPJ3 140 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 TMEM14BQ9NUH8 114 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 ELF5Q9UKW6 265 aaPredicted RBP8.64□□□□□ -1.03
CTNS-208ENST00000574218 TBC1D24Q9ULP9 559 aa8.64□□□□□ -1.03
CTNS-208ENST00000574218 ELOA3CA0A087WX78 387 aaPredicted RBP8.63□□□□□ -1.03
CTNS-208ENST00000574218 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 TEX50A0A1B0GTY4 177 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 IFITM5A6NNB3 132 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 K7EIM0 57 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 GNG7O60262 68 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 SCGNO76038 276 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 CTSGP08311 255 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 FCGR2CP31995 323 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 FABP5Q01469 135 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 RCN1Q15293 331 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 ZNF767PQ75MW2 155 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 OR51H1Q8NH63 302 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 MISP3Q96FF7 219 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 OR10C1Q96KK4 312 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 SLC5A7Q9GZV3 580 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 PLEKHA2Q9HB19 425 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 COMMD9Q9P000 198 aa8.63□□□□□ -1.03
CTNS-208ENST00000574218 TMEM235A6NFC5 223 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 ZNF705EA8MWA4 302 aaPredicted RBP8.62□□□□□ -1.03
CTNS-208ENST00000574218 C16orf90A8MZG2 172 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 F8W735 103 aaPredicted RBP8.62□□□□□ -1.03
CTNS-208ENST00000574218 RAB3BP20337 219 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 OR10A3P58181 314 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 FXYD4P59646 89 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 MLLT11Q13015 90 aaPredicted RBP8.62□□□□□ -1.03
CTNS-208ENST00000574218 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 TPRA1Q86W33 373 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 TSPAN14Q8NG11 270 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 BORCS5Q969J3 196 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 TXN2Q99757 166 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 NXF2Q9GZY0 626 aaKnown RBP8.62□□□□□ -1.03
CTNS-208ENST00000574218 OR51B2Q9Y5P1 312 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 HSPG2P98160 4391 aa8.62□□□□□ -1.03
CTNS-208ENST00000574218 TRAV1-2A0A0B4J238 106 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 IGHV3-66A0A0C4DH42 116 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 A0A1W2PS18 150 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 C12orf74Q32Q52 190 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 UBE2UQ5VVX9 321 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 TRPT1Q86TN4 253 aaKnown RBP8.61□□□□□ -1.03
CTNS-208ENST00000574218 STXBP6Q8NFX7 210 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 OR1P1Q8NH06 330 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 ZNF414Q96IQ9 312 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 VCXQ9H320 206 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 NDUFA4L2Q9NRX3 87 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 CLEC5AQ9NY25 188 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 FKBP11Q9NYL4 201 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 CELA1Q9UNI1 258 aa8.61□□□□□ -1.03
CTNS-208ENST00000574218 TPRKBQ9Y3C4 175 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms