RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 DUS4LO95620 317 aaKnown RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 IFNA17P01571 189 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 IGHV3-11P01762 117 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 VAMP1P23763 118 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 ERHP84090 104 aaKnown RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 RHOGP84095 191 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 PRCDQ00LT1 54 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 ZNF616Q08AN1 781 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 PPP1R1AQ13522 171 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 LINC00482Q8N8I6 264 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 LHFPL5Q8TAF8 219 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 RCC1LQ96I51 464 aaKnown RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 OR5B12Q96R08 314 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 MCRIP2Q9BUT9 160 aaKnown RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 GPR61Q9BZJ8 451 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 ALX4Q9H161 411 aaPredicted RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 RANGRFQ9HD47 186 aaPredicted RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.54□□□□□ -1.04
CHD3-216ENST00000573936 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 DBX1A6NMT0 343 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 OR2J3O76001 311 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 PRH1P02810 166 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 REG1AP05451 166 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 OR4E1P0C645 316 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 DEFB136Q30KP8 78 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 ZNF343Q6P1L6 599 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 REC114Q7Z4M0 266 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 SLC35G3Q8N808 338 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 LRTM2Q8N967 370 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 OR10W1Q8NGF6 305 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 OR52B4Q8NGK2 314 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 OR52E5Q8NH55 327 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 CXorf58Q96LI9 332 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 DUX3Q96PT4 197 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 SEC22CQ9BRL7 303 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 PLEKHA3Q9HB20 300 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 ENY2Q9NPA8 101 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 FBXL7Q9UJT9 491 aa8.53□□□□□ -1.04
CHD3-216ENST00000573936 IGLV11-55A0A075B6I3 123 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 A0A0G2JRQ6 117 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 C9orf170A2RU37 121 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 INS-IGF2F8WCM5 200 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 PLXNB1O43157 2135 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 ST8SIA3O43173 380 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
CHD3-216ENST00000573936 IL5P05113 134 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 SULT1A3P0DMM9 295 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 SULT1A4P0DMN0 295 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 ZP3P21754 424 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 SPCS3P61009 180 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 DHRS2Q13268 280 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 FHL3Q13643 280 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 EXOSC2Q13868 293 aaKnown RBP8.52□□□□□ -1.05
CHD3-216ENST00000573936 IZUMO4Q1ZYL8 232 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 C15orf32Q32M92 178 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 SLC25A24Q6NUK1 477 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 LYG2Q86SG7 212 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 COQ8AQ8NI60 647 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 EEF1AKMT3Q96AZ1 226 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 PRR13Q9NZ81 148 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 PEF1Q9UBV8 284 aaKnown RBP8.52□□□□□ -1.05
CHD3-216ENST00000573936 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
CHD3-216ENST00000573936 F11RQ9Y624 299 aaKnown RBP8.52□□□□□ -1.05
CHD3-216ENST00000573936 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.51□□□□□ -1.05
CHD3-216ENST00000573936 TRBV7-1A0A0A6YYK4 115 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 A0A1B0GU03 582 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 ANKRD34BA5PLL1 514 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 G3V4G9 280 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 PRAF2O60831 178 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 NDUFB8O95169 186 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 SNCAP37840 140 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 HOXA1P49639 335 aaPredicted RBP8.51□□□□□ -1.05
CHD3-216ENST00000573936 SUB1P53999 127 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHD3-216ENST00000573936 SMCO1Q147U7 214 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 ANKRD55Q3KP44 614 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 AARDQ4LEZ3 155 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 Q6ZRM9 215 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 LYZL2Q7Z4W2 148 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 OR2C3Q8N628 320 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 OR1P1Q8NH06 330 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 TMED3Q9Y3Q3 217 aa8.51□□□□□ -1.05
CHD3-216ENST00000573936 IGHV4OR15-8A0A075B7B6 117 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 A0A087WW49 117 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 C7orf66A4D0T2 115 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 PRB2P02812 416 aaPredicted RBP8.5□□□□□ -1.05
CHD3-216ENST00000573936 SLC25A6P12236 298 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 DEFA5Q01523 94 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 NMSQ5H8A3 153 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 Q6ZNX1 250 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 C19orf35Q6ZS72 473 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 ZNF114Q8NC26 417 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 VN1R17PQ8TDU5 208 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms