RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 DOCK4Q8N1I0 1966 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 TMSB15BA0A087X1C1 80 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 ETV2O00321 342 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 RRHO14718 337 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 CECR9P0C854 216 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 CACNG7P62955 275 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 PSG7Q13046 419 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 OR9G4Q8NGQ1 327 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 TSKUQ8WUA8 353 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 CENPFP49454 3210 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 IGHV2OR16-5A0A0B4J2B6 119 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 A0A0G2JLM5 398 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 IGFBP2P18065 325 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 FOXA2Q9Y261 457 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 LOC105371242A0A075B767 164 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 MEX3AA1L020 520 aaKnown RBP10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 PRR19A6NJB7 356 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 PROB1E7EW31 1015 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 PCP4P48539 62 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 LHX2P50458 406 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 TFF3Q07654 80 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 CDCP2Q5VXM1 449 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 UNC13CQ8NB66 2214 aa10.39□□□□□ -0.75
PCDHGA9-201ENST00000573521 GHRHP01286 108 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 FTH1P19P0C7X4 201 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 CLEC2AQ6UVW9 174 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 OR13A1Q8NGR1 328 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 DYNLRB2Q8TF09 96 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 RTN4RQ9BZR6 473 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 A0A0A6YYD4 124 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 F2Z2F3 143 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 SPRED2Q7Z698 418 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 C2orf88Q9BSF0 95 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 NCOR1P1Q9H4R4 102 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 PATE3B3GLJ2 98 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 DUTP33316 252 aaKnown RBP10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 ATP5G3P48201 142 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 MORN2Q502X0 79 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 STPG1Q5TH74 334 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 FAM169BQ8N8A8 192 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 EPDR1Q9UM22 224 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 DNAH12Q6ZR08 3092 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 C19orf54Q5BKX5 351 aa10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 SLC25A48Q6ZT89 311 aaKnown RBP10.38□□□□□ -0.75
PCDHGA9-201ENST00000573521 TRAV24A0A0B4J272 114 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 CCL21O00585 134 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 NABP1Q96AH0 204 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 SERF1AO75920 110 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 MAP1BP46821 2468 aaKnown RBP10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 IGKV1D-13A0A0B4J2D9 117 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 IGKV1-13P0DP09 117 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 TIMP3P35625 211 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 SPANXA1Q9NS26 97 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 C21orf62Q9NYP8 219 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 ZFP36L1Q07352 338 aaKnown RBP10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 KIAA1644Q3SXP7 199 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 FSCN3Q9NQT6 498 aa10.37□□□□□ -0.75
PCDHGA9-201ENST00000573521 FABP5P3A8MUU1 101 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 TIAF1O95411 115 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 GFRA1P56159 465 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 ADIPOQQ15848 244 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 MBNL2Q5VZF2 373 aaKnown RBP10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 LYPD1Q8N2G4 141 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 RAX2Q96IS3 184 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 WFDC1Q9HC57 220 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 PLXNA3P51805 1871 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 MST1P26927 711 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 TMPRSS3P57727 454 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 TMEM74BQ9NUR3 256 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 CABIN1Q9Y6J0 2220 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 IL18BPO95998 194 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 HBDP02042 147 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 GPR183P32249 361 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 ASIPP42127 132 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 DDB2Q92466 427 aa10.36□□□□□ -0.75
PCDHGA9-201ENST00000573521 TYMSP04818 313 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 H3BVH4 76 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 GPX1P07203 203 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 UMODP07911 640 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 RFPL3SP0C7P2 107 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 EFNB3Q15768 340 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms