RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DEC1Q9P2X7 70 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 MAGI1Q96QZ7 1491 aaPredicted RBP3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 KIF13BQ9NQT8 1826 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 KDM6AO15550 1401 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 TNS2Q63HR2 1409 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 DYSFO75923 2080 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF106Q9H2Y7 1883 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 PZPP20742 1482 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 ARHGAP35Q9NRY4 1499 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 IGLV7-46A0A075B6I9 117 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV3OR15-7A0A075B7D8 119 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV3-72A0A0B4J1Y9 119 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 C9JCJ5 164 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 LY6G6DO95868 133 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 RPL22P35268 128 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 DIO3P55073 304 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 TAS2R45P59539 299 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 BTG2P78543 158 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 HSD52Q0P140 79 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 IGFL4Q6B9Z1 124 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 FAAP20Q6NZ36 180 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF880Q6PDB4 577 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 MORN3Q6PF18 240 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 LINC00305Q7Z4B0 112 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 RPP25LQ8N5L8 163 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 OR5D14Q8NGL3 314 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 OR5C1Q8NGR4 320 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 OR10AC1Q8NH08 325 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 DEDD2Q8WXF8 326 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 SLC25A46Q96AG3 418 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 TBL1YQ9BQ87 522 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 HDHD3Q9BSH5 251 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 FGF23Q9GZV9 251 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 SCN10AQ9Y5Y9 1956 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 FOCADQ5VW36 1801 aa3.63□□□□□ -1.83
TOPBP1-210ENST00000572787 MYOM2P54296 1465 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 PNMA8CA0A1B0GUJ8 204 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 SPAARA0A1B0GVQ0 90 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 INS-IGF2F8WCM5 200 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 FAM72CH0Y354 149 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 M0R378 163 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 OR2T1O43869 369 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1-39P01597 117 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1-5P01602 117 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1D-39P04432 117 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 INAFM2P0DMQ5 153 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 FABP2P12104 132 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 S100A4P26447 101 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 TIMM10P62072 90 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 PLGLB1Q02325 96 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 MEIG1Q5JSS6 88 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 FAM72AQ5TYM5 149 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 FAM72DQ6L9T8 149 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 LCN15Q6UWW0 184 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF329Q86UD4 541 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 FAM72BQ86X60 149 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 C3orf22Q8N5N4 141 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 FER1L6-AS1Q8NA97 138 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 CHAC1Q9BUX1 264 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 MARCOQ9UEW3 520 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 COX11Q9Y6N1 276 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 ANKRD36BQ8N2N9 1353 aa3.62□□□□□ -1.83
TOPBP1-210ENST00000572787 NSD3Q9BZ95 1437 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 NCAPD3P42695 1498 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1D-43A0A0B4J1Z2 117 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 TRAV13-1A0A0B4J241 112 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV3-66A0A0C4DH42 116 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1-6A0A0C4DH72 117 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF860A6NHJ4 632 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 A8MWL6 223 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 LEUTXA8MZ59 168 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 I3L521 148 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 PHOX2AO14813 284 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 KRASP01116 189 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV3-13P01766 116 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF32P17041 273 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 CRHBPP24387 322 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 BRS3P32247 399 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF93P35789 620 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 NMUP48645 174 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF80P51504 273 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 AQP4P55087 323 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 TPPP2P59282 170 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 QRFPP83859 136 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 MYL5Q02045 173 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 KLF9Q13886 244 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF876PQ49A33 203 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 TIFABQ6ZNK6 161 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 SLC25A42Q86VD7 318 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 GKN2Q86XP6 184 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 SUMF2Q8NBJ7 301 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 OR4K13Q8NH42 304 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 DCANP1Q8TF63 244 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 SDF2Q99470 211 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 SNRNP25Q9BV90 132 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 FGFBP2Q9BYJ0 223 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 BANF2Q9H503 90 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF556Q9HAH1 456 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms