RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PRR20AP86496 221 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 C2orf68Q2NKX9 166 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 PDLIM3Q53GG5 364 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 C19orf54Q5BKX5 351 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 SLC25A24Q6NUK1 477 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 OR2C3Q8N628 320 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 OR1L6Q8NGR2 347 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 CIB3Q96Q77 187 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 ZFP57Q9NU63 452 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 THYN1Q9P016 225 aa7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 PAIP2BQ9ULR5 123 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-208ENST00000572351 NUDT19A8MXV4 375 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 L7N2F9 121 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 SYNGR2O43760 224 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 OR2J3O76001 311 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 IFNA10P01566 189 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 RPLP1P05386 114 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 IAPPP10997 89 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 HIST1H1BP16401 226 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 CTRB1P17538 263 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 PVALBP20472 110 aaPredicted RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 PSMB8P28062 276 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 HTR2BP41595 481 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 RAB9AP51151 201 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 RRAS2P62070 204 aaPredicted RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 POLR2GP62487 172 aaKnown RBP eCLIP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 VAMP2P63027 116 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 RPP30P78346 268 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 RHOGP84095 191 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 CYCSP99999 105 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 FCN2Q15485 313 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 CTRB2Q6GPI1 263 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 C19orf35Q6ZS72 473 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 SLC24A4Q8NFF2 622 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 MDFIQ99750 246 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 KLK15Q9H2R5 256 aa7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 LSM5Q9Y4Y9 91 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 F11RQ9Y624 299 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-208ENST00000572351 MXRA5Q9NR99 2828 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 A0A0G2JLM5 398 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 A0A1W2PRX2 142 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 INS-IGF2F8WCM5 200 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 LY86O95711 162 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 ID3Q02535 119 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 ATP5G2Q06055 141 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 SRSF4Q08170 494 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 NSUN5P1Q3KNT7 163 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 LRRC37A5PQ49AS3 106 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 TCTEX1D4Q5JR98 221 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 HIST2H2BDQ6DRA6 164 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 SHISA2Q6UWI4 295 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 NOXA1Q86UR1 476 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 ZNF114Q8NC26 417 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 NECAP1Q8NC96 275 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 OR1P1Q8NH06 330 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 WIPF2Q8TF74 440 aaPredicted RBP7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 PINX1Q96BK5 328 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 USMG5Q96IX5 58 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 RAB40CQ96S21 281 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 P2RX4Q99571 388 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 ZNF747Q9BV97 191 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 NMES1Q9C002 83 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 FBXL7Q9UJT9 491 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 TSSC4Q9Y5U2 329 aaPredicted RBP7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 U3KQ87 197 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 ZFHX3Q15911 3703 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 NF1P21359 2839 aa7.37□□□□□ -1.23
NPLOC4-208ENST00000572351 JMJD1CQ15652 2540 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 IGLV11-55A0A075B6I3 123 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 FAM223BA6NKX1 122 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 J3QL48 77 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 K7EPK0 472 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 CORTO00230 105 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 BRI3O95415 125 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 IGHV3-11P01762 117 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 MBPP02686 304 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 RLN2P04090 185 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 IFNA4P05014 189 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 OR8U8P0C7N1 319 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 CXCL3P19876 107 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 NPY1RP25929 384 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 BCAP31P51572 246 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 H2BFSP57053 126 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 KRTAP10-3P60369 221 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 RAB11AP62491 216 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 RPL23AP62750 156 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 CD83Q01151 205 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 DEFA5Q01523 94 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 RAB32Q13637 225 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 C15orf32Q32M92 178 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 KRTAP21-3Q3LHN1 58 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 SPANXN5Q5MJ07 72 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 C11orf87Q6NUJ2 197 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 FAM223AQ8IWN6 122 aa7.36□□□□□ -1.23
NPLOC4-208ENST00000572351 RNF152Q8N8N0 203 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms