RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CR1P17927 2039 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 SMCO3A2RU48 225 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 ENSAO43768 121 aaKnown RBP13.94□□□□□ -0.18
RPAIN-208ENST00000571043 IGKV1D-33P01593 117 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 IGKV1-33P01594 117 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 HSPB1P04792 205 aaKnown RBP13.94□□□□□ -0.18
RPAIN-208ENST00000571043 OPRK1P41145 380 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 DLX1P56177 255 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 ERHP84090 104 aaKnown RBP13.94□□□□□ -0.18
RPAIN-208ENST00000571043 ACOT6Q3I5F7 207 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-208ENST00000571043 KHDC3LQ587J8 217 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 LCN15Q6UWW0 184 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 OR10G4Q8NGN3 311 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 OR10G9Q8NGN4 311 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 OR10G7Q8NGN6 311 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 RARRES2Q99969 163 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 ACTR3CQ9C0K3 210 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-208ENST00000571043 UNKLQ9H9P5 680 aaKnown RBP13.94□□□□□ -0.18
RPAIN-208ENST00000571043 KCNIP2Q9NS61 270 aa13.94□□□□□ -0.18
RPAIN-208ENST00000571043 ABCA1O95477 2261 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 CTXND1A0A1B0GTU2 59 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 MAP1LC3B2A6NCE7 125 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 OPN1MWP04001 364 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 OPN1MW2P0DN77 364 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 OPN1MW3P0DN78 364 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 MOB3BQ86TA1 216 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 WFDC11Q8NEX6 87 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 MAP1LC3BQ9GZQ8 125 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 ZNF430Q9H8G1 570 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-208ENST00000571043 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 LSM4Q9Y4Z0 139 aaKnown RBP13.93□□□□□ -0.18
RPAIN-208ENST00000571043 ZANQ9Y493 2812 aa13.93□□□□□ -0.18
RPAIN-208ENST00000571043 IGHV3-72A0A0B4J1Y9 119 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 LOC102723971A0A1B0GUV8 181 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 DNASE2O00115 360 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-208ENST00000571043 CYB5BO43169 146 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 SLC25A17O43808 307 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 CRYGBP07316 175 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 RNASE2P10153 161 aaKnown RBP13.92□□□□□ -0.18
RPAIN-208ENST00000571043 HTR1DP28221 377 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 LOXL1Q08397 574 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-208ENST00000571043 ICAM4Q14773 271 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 HAGHQ16775 308 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 ARSJQ5FYB0 599 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-208ENST00000571043 SSX7Q7RTT5 188 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
RPAIN-208ENST00000571043 FLNAP21333 2647 aaKnown RBP13.91□□□□□ -0.18
RPAIN-208ENST00000571043 MAS1LP35410 378 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 CEACAM3P40198 252 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 PRB3Q04118 309 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-208ENST00000571043 RAB31Q13636 194 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 HNF4GQ14541 408 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 TEPPQ6URK8 271 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 RITA1Q96K30 269 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 MGST2Q99735 147 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 SIRT7Q9NRC8 400 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 TEX15Q9BXT5 2789 aa13.91□□□□□ -0.18
RPAIN-208ENST00000571043 A0A1W2PPI3 338 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 SEC14L6B5MCN3 397 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 RNF223E7ERA6 249 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 IFNA1P01562 189 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 SRP19P09132 144 aaKnown RBP13.9□□□□□ -0.18
RPAIN-208ENST00000571043 ZFP36P26651 326 aaKnown RBP13.9□□□□□ -0.18
RPAIN-208ENST00000571043 PSG5Q15238 335 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 PRSS8Q16651 343 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 HCP5Q6MZN7 132 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 MRPL41Q8IXM3 137 aaKnown RBP13.9□□□□□ -0.18
RPAIN-208ENST00000571043 CLRN3Q8NCR9 226 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 C1orf159Q96HA4 380 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 GGTLC1Q9BX51 225 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
RPAIN-208ENST00000571043 POLR3KQ9Y2Y1 108 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-208ENST00000571043 CGB1A6NKQ9 187 aa13.9□□□□□ -0.19
RPAIN-208ENST00000571043 BCL2P10415 239 aa13.9□□□□□ -0.19
RPAIN-208ENST00000571043 GPX4P36969 197 aaPredicted RBP13.9□□□□□ -0.19
RPAIN-208ENST00000571043 NPBWR1P48145 328 aa13.9□□□□□ -0.19
RPAIN-208ENST00000571043 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.19
RPAIN-208ENST00000571043 SOHLH1Q5JUK2 328 aa13.9□□□□□ -0.19
RPAIN-208ENST00000571043 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.19
RPAIN-208ENST00000571043 OR10W1Q8NGF6 305 aa13.9□□□□□ -0.19
RPAIN-208ENST00000571043 CACNG8Q8WXS5 425 aa13.9□□□□□ -0.19
RPAIN-208ENST00000571043 OTOGQ6ZRI0 2925 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 CSPG4Q6UVK1 2322 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 ACANP16112 2415 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 FOXH1O75593 365 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 TAGLN2P37802 199 aaKnown RBP13.89□□□□□ -0.19
RPAIN-208ENST00000571043 FGF8P55075 233 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-208ENST00000571043 PAX2Q02962 417 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 TMEM249Q2WGJ8 235 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 FAM122CQ6P4D5 195 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 RBMS3Q6XE24 437 aaKnown RBP13.89□□□□□ -0.19
RPAIN-208ENST00000571043 TMEM144Q7Z5S9 345 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 RNASEH2CQ8TDP1 164 aaKnown RBP13.89□□□□□ -0.19
RPAIN-208ENST00000571043 RXFP4Q8TDU9 374 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 SLC25A22Q9H936 323 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 TMA7Q9Y2S6 64 aaKnown RBP13.89□□□□□ -0.19
RPAIN-208ENST00000571043 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms