RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 OR51B2Q9Y5P1 312 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 CEPT1Q9Y6K0 416 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 TEX50A0A1B0GTY4 177 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF785A8K8V0 405 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 GABARAPO95166 117 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 IFNA6P05013 189 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 SERPINE2P07093 398 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 CD7P09564 240 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 PTBP1P26599 531 aaKnown RBP eCLIP9.32□□□□□ -0.925e-14■□□□□ 9.8
CTDNEP1-205ENST00000570828 WT1-ASQ06250 92 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF585BQ52M93 769 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF57Q68EA5 555 aaPredicted RBP9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 PLET1Q6UQ28 207 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 SLC16A13Q7RTY0 426 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 SLC38A6Q8IZM9 456 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 CADM3Q8N126 398 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 VN1R17PQ8TDU5 208 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 WDR89Q96FK6 387 aaPredicted RBP9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 TSC22D3Q99576 134 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 KRTAP4-9Q9BYQ8 210 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 FAM212BQ9NTI7 297 aaPredicted RBP9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 FKBP11Q9NYL4 201 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 NSG2Q9Y328 171 aa9.32□□□□□ -0.92
CTDNEP1-205ENST00000570828 IGHV3-35A0A0C4DH35 117 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 TGOLN2O43493 480 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 SMIM18P0DKX4 95 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 ODF1Q14990 250 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 RNASE12Q5GAN4 147 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 SLC25A24Q6NUK1 477 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 BTNL8Q6UX41 500 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 UNQ9165/PRO28630Q6UXU0 137 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 TBC1D26Q86UD7 250 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 TMEM61Q8N0U2 210 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 UXS1Q8NBZ7 420 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 MARC2Q969Z3 335 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 TMEM56Q96MV1 263 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 MRPL18Q9H0U6 180 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 SRD5A3Q9H8P0 318 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 MLXQ9UH92 298 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 UFC1Q9Y3C8 167 aa9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 F11RQ9Y624 299 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR2T8A6NH00 312 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 M0QYG6 137 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 UCP3P55916 312 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 CTF1Q16619 201 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 RNASE10Q5GAN6 216 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 H2BFWTQ7Z2G1 175 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 BSCL2Q96G97 398 aaPredicted RBP9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 NAA50Q9GZZ1 169 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 EDA2RQ9HAV5 297 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 EXTL2Q9UBQ6 330 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 SELENOKQ9Y6D0 94 aa9.3□□□□□ -0.92
CTDNEP1-205ENST00000570828 IGHV3-21A0A0B4J1V1 117 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 SCAF4O95104 1147 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 PGAM2P15259 253 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF182P17025 639 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 TBPP20226 339 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 ELLP55199 621 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 ANKRD55Q3KP44 614 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 GPR107Q5VW38 600 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 SPSB3Q6PJ21 355 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 RBPMS2Q6ZRY4 209 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 UBAC2Q8NBM4 344 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR52B4Q8NGK2 314 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR4A16Q8NH70 328 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 TMEM190Q8WZ59 177 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 MRGPRFQ96AM1 343 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 ATP6V0BQ99437 205 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF436Q9C0F3 470 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 WDR12Q9GZL7 423 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 RETNQ9HD89 108 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 C21orf62Q9NYP8 219 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 MRPL27Q9P0M9 148 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 KLK11Q9UBX7 282 aa9.29□□□□□ -0.92
CTDNEP1-205ENST00000570828 TRAV25A0A0B4J276 109 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 DBX1A6NMT0 343 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 F8W735 103 aaPredicted RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 RBMY1DP0C7P1 496 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 MFAP2P55001 183 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 Q56UQ5 140 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZFAND6Q6FIF0 208 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 ARRDC1Q8N5I2 433 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR1P1Q8NH06 330 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR52I2Q8NH67 350 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 SCARB1Q8WTV0 552 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 C15orf40Q8WUR7 153 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF486Q96H40 463 aaPredicted RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 SEC22AQ96IW7 307 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 MRPS26Q9BYN8 205 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms