RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 DCKP27707 260 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 SERPINB10P48595 397 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 TAS2R43P59537 309 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 FCN2Q15485 313 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 TMPRSS11AQ6ZMR5 421 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 TMEM91Q6ZNR0 172 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 C1orf158Q8N1D5 194 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 STXBP6Q8NFX7 210 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 SUN5Q8TC36 379 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 UHRF2Q96PU4 802 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 NXF2Q9GZY0 626 aaKnown RBP4.99□□□□□ -1.61
SMG6-205ENST00000570659 VCX3BQ9H321 246 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 TMEM140Q9NV12 185 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 BET1LQ9NYM9 111 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 RBM7Q9Y580 266 aaKnown RBP4.99□□□□□ -1.61
SMG6-205ENST00000570659 F11RQ9Y624 299 aaKnown RBP4.99□□□□□ -1.61
SMG6-205ENST00000570659 LRP2P98164 4655 aa4.99□□□□□ -1.61
SMG6-205ENST00000570659 LOC100130705A0A1B0GUX0 176 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 SULT1C2O00338 296 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 SSX5O60225 188 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 CREBL2O60519 120 aaPredicted RBP4.98□□□□□ -1.61
SMG6-205ENST00000570659 B3GALNT1O75752 331 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 IGKV3-20P01619 116 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 SPART-AS1P0CW21 52 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 SPP1P10451 314 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 TPBGQ13641 420 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 RCN1Q15293 331 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 C2orf76Q3KRA6 126 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 ZNF709Q8N972 641 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 OR4S2Q8NH73 311 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 SLC25A46Q96AG3 418 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 GINS4Q9BRT9 223 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 NIPSNAP3BQ9BS92 247 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 QTRT1Q9BXR0 403 aaKnown RBP4.98□□□□□ -1.61
SMG6-205ENST00000570659 HRASLSQ9HDD0 168 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 NDUFA4L2Q9NRX3 87 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 MGAT4AQ9UM21 535 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 OR2W1Q9Y3N9 320 aa4.98□□□□□ -1.61
SMG6-205ENST00000570659 YTHDF2Q9Y5A9 579 aaKnown RBP4.98□□□□□ -1.61
SMG6-205ENST00000570659 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 KRTAP29-1A8MX34 341 aaPredicted RBP4.97□□□□□ -1.61
SMG6-205ENST00000570659 H3BMM0 161 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 M0QYG6 137 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 DNASE2O00115 360 aaPredicted RBP4.97□□□□□ -1.61
SMG6-205ENST00000570659 SLC17A2O00624 439 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 DHFRP00374 187 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 UCHL1P09936 223 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 OR10A3P58181 314 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 RPL11P62913 178 aaKnown RBP4.97□□□□□ -1.61
SMG6-205ENST00000570659 ST3GAL4Q11206 333 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 POU2AF1Q16633 256 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 MLANAQ16655 118 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 PSMG4Q5JS54 123 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 HES5Q5TA89 166 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 OR56B1Q8NGI3 324 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 RNF141Q8WVD5 230 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 FRZBQ92765 325 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 TMEM203Q969S6 136 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 HINT2Q9BX68 163 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 SLC35B3Q9H1N7 401 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 FAM30AQ9NZY2 134 aa4.97□□□□□ -1.61
SMG6-205ENST00000570659 PUS1Q9Y606 427 aaKnown RBP eCLIP4.97□□□□□ -1.61
SMG6-205ENST00000570659 TRAV2A0A0B4J234 112 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 RPS10-NUDT3A0A1W2PQS6 291 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 PLAC8L1A1L4L8 177 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 SNTNA6NMZ2 147 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 NUDT3O95989 172 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 MT-CO2P00403 227 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 FCER2P06734 321 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 TRAPPC2P0DI81 140 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 TRAPPC2BP0DI82 140 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 HIST1H1DP16402 221 aaKnown RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 ELK1P19419 428 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 BTF3P20290 206 aaKnown RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 NPY1RP25929 384 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 RASSF2P50749 326 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 CMC4P56277 68 aaPredicted RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 KRTAP10-4P60372 401 aaPredicted RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 RPS25P62851 125 aaKnown RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 DNAL1Q4LDG9 190 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 SPAG16Q8N0X2 631 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 CCDC197Q8NCU1 140 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 VSTM2AQ8TAG5 236 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 NUDCD2Q8WVJ2 157 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 PHYHIPQ92561 330 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 FAM3DQ96BQ1 224 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 RAB3CQ96E17 227 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 MISP3Q96FF7 219 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 TMEM80Q96HE8 168 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 FAM210BQ96KR6 192 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 Q96MT0 163 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 NEU1Q99519 415 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 URM1Q9BTM9 101 aaKnown RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 DCSTAMPQ9H295 470 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 MRPS7Q9Y2R9 242 aaKnown RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 LSM2Q9Y333 95 aaKnown RBP4.96□□□□□ -1.62
SMG6-205ENST00000570659 PRELID3BQ9Y3B1 194 aa4.96□□□□□ -1.62
SMG6-205ENST00000570659 A6NJY4 79 aa4.95□□□□□ -1.62
SMG6-205ENST00000570659 PRSS47A8MTI9 375 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms